Draft genome of a member of ascomycotal fungal genus Pseudopithomyces (family Didymosphaeriaceae)
Krithika Arumugam, Sherilyn Ho, Irina Bessarab, Falicia Q. Y. Goh, Mindia A. S. Haryono, Ezequiel Santillan, Stefan Wuertz, Yvonne Chow, Rohan B. H. Williams
TL;DR
This paper presents the draft genome of a Pseudopithomyces fungus isolated from brewery wastewater, providing insights into its genetic makeup and taxonomy.
Contribution
The study provides a high-quality draft genome for a Pseudopithomyces species using multiple taxonomic validation methods.
Findings
The draft genome is 39.65 Mbp long and consists of 43 contigs.
BUSCO analysis showed a completeness of 98.9%, indicating high quality.
Taxonomic classification was confirmed using ITS, mitochondrial DNA, and k-mer analysis.
Abstract
We report a draft genome of a species from the ascomycotal fungal genus Pseudopithomyces (isolate name SBW1) obtained using a culture isolate from brewery wastewater. The 43 contig genome has a length of 39.65 Mbp, with Benchmarking Universal Single-Copy Orthologs (BUSCO) completeness of 98.9%. Taxonomic assignment was supported by internal transcribed spacer (ITS) sequence, mitochondrial DNA sequence, and k-mer analysis.
Genes, proteins, chemicals, diseases, species, mutations and cell lines named across the full text — each resolved to its canonical identifier and authoritative record.
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Taxonomy
TopicsPlant Pathogens and Fungal Diseases · Genomics and Phylogenetic Studies · Mycorrhizal Fungi and Plant Interactions