# Tau Isoforms: Gaining Insight into MAPT Alternative Splicing

**Authors:** Andrea Corsi, Cristina Bombieri, Maria Teresa Valenti, Maria Grazia Romanelli

PMC · DOI: 10.3390/ijms232315383 · International Journal of Molecular Sciences · 2022-12-06

## TL;DR

This paper reviews how different forms of the Tau protein are created through alternative splicing and their role in neurodegenerative diseases.

## Contribution

The paper summarizes recent findings on cis-elements and ribonucleoproteins regulating Tau splicing.

## Key findings

- Tau isoforms are linked to diseases like Alzheimer’s and frontotemporal dementia.
- Alternative splicing of MAPT transcripts is regulated by cis-elements and ribonucleoproteins.
- Understanding Tau splicing could lead to RNA-based therapies for tauopathies.

## Abstract

Tau microtubule-associated proteins, encoded by the MAPT gene, are mainly expressed in neurons participating in axonal transport and synaptic plasticity. Six major isoforms differentially expressed during cell development and differentiation are translated by alternative splicing of MAPT transcripts. Alterations in the expression of human Tau isoforms and their aggregation have been linked to several neurodegenerative diseases called tauopathies, including Alzheimer’s disease, progressive supranuclear palsy, Pick’s disease, and frontotemporal dementia with parkinsonism linked to chromosome 17. Great efforts have been dedicated in recent years to shed light on the complex regulatory mechanism of Tau splicing, with a perspective to developing new RNA-based therapies. This review summarizes the most recent contributions to the knowledge of Tau isoform expression and experimental models, highlighting the role of cis-elements and ribonucleoproteins that regulate the alternative splicing of Tau exons.

## Linked entities

- **Genes:** MAPT (microtubule associated protein tau) [NCBI Gene 4137]
- **Proteins:** MAPT (microtubule associated protein tau)
- **Diseases:** Alzheimer’s disease (MONDO:0004975), progressive supranuclear palsy (MONDO:0019037), frontotemporal dementia (MONDO:0010857)

## Full-text entities

- **Genes:** TIA1 (TIA1 cytotoxic granule associated RNA binding protein) [NCBI Gene 7072] {aka ALS26, TIA-1, WDM}, SRSF7 (serine and arginine rich splicing factor 7) [NCBI Gene 6432] {aka 9G8, AAG3, SFRS7}, GSK3B (glycogen synthase kinase 3 beta) [NCBI Gene 2932], SUGP1 (SURP and G-patch domain containing 1) [NCBI Gene 57794] {aka F23858, RBP, SF4}, SFPQ (splicing factor proline and glutamine rich) [NCBI Gene 6421] {aka POMP100, PPP1R140, PSF}, fkbp4 (FKBP prolyl isomerase 4) [NCBI Gene 321795] {aka wu:fb34f09}, HNRNPC (heterogeneous nuclear ribonucleoprotein C) [NCBI Gene 3183] {aka HNRNP, HNRPC, MRD74, SNRPC}, ABL1 (ABL proto-oncogene 1, non-receptor tyrosine kinase) [NCBI Gene 25] {aka ABL, BCR-ABL, CHDSKM, JTK7, bcr/abl, c-ABL}, RBMXP1 (RBMX pseudogene 1) [NCBI Gene 3186] {aka HNRNP-G, HNRPG}, KHSRP (KH-type splicing regulatory protein) [NCBI Gene 8570] {aka FBP2, FUBP2, KSRP, p75}, KHDRBS3 (KH RNA binding domain containing, signal transduction associated 3) [NCBI Gene 10656] {aka Etle, SALP, SLM-2, SLM2, T-STAR, TSTAR}, SRSF2 (serine and arginine rich splicing factor 2) [NCBI Gene 6427] {aka PR264, SC-35, SC35, SFRS2, SFRS2A, SRp30b}, CELF6 (CUGBP Elav-like family member 6) [NCBI Gene 60677] {aka BRUNOL6}, YTHDC1 (YTH N6-methyladenosine RNA binding protein C1) [NCBI Gene 91746] {aka YT521, YT521-B}, RBM4 (RNA binding motif protein 4) [NCBI Gene 5936] {aka LARK, RBM4A, ZCCHC21, ZCRB3A}, CELF5 (CUGBP Elav-like family member 5) [NCBI Gene 60680] {aka BRUNOL-5, BRUNOL5, CELF-5}, KHDRBS2 (KH RNA binding domain containing, signal transduction associated 2) [NCBI Gene 202559] {aka KHDRBS2-OT, KHDRBS2-OT1, SLM-1, SLM1}, RAVER2 (ribonucleoprotein, PTB binding 2) [NCBI Gene 55225], CELF4 (CUGBP Elav-like family member 4) [NCBI Gene 56853] {aka BRUNOL4, CELF-4}, PTBP2 (polypyrimidine tract binding protein 2) [NCBI Gene 58155] {aka PTBLP, brPTB, nPTB}, SRSF4 (serine and arginine rich splicing factor 4) [NCBI Gene 6429] {aka SFRS4, SRP75}, MAPT (microtubule associated protein tau) [NCBI Gene 4137] {aka DDPAC, FTD1, FTDP-17, MAPTL, MSTD, MTBT1}, DHX15 (DEAH-box helicase 15) [NCBI Gene 1665] {aka DBP1, DDX15, PRP43, PRPF43, PrPp43p, hPrp43}, PTBP1 (polypyrimidine tract binding protein 1) [NCBI Gene 5725] {aka HNRNP-I, HNRNPI, HNRPI, PTB, PTB-1, PTB-T}, SRSF1 (serine and arginine rich splicing factor 1) [NCBI Gene 6426] {aka ASF, NEDFBA, SF2, SF2p33, SFRS1, SRp30a}, SFSWAP (splicing factor SWAP) [NCBI Gene 6433] {aka SFRS8, SWAP}, MAPT-IT1 (MAPT intronic transcript 1) [NCBI Gene 100130148], SRSF6 (serine and arginine rich splicing factor 6) [NCBI Gene 6431] {aka B52, HEL-S-91, SFRS6, SRP55}, THRAP3 (thyroid hormone receptor associated protein 3) [NCBI Gene 9967] {aka BCLAF2, TRAP150}, STH (saitohin) [NCBI Gene 246744] {aka MAPTIT}, MAP4 (microtubule associated protein 4) [NCBI Gene 4134], Tia1 (cytotoxic granule-associated RNA binding protein 1) [NCBI Gene 21841] {aka 2310050N03Rik, TIA-1, mTIA-1}, EMG1 (EMG1 N1-specific pseudouridine methyltransferase) [NCBI Gene 10436] {aka C2F, Grcc2f, NEP1}, PRPF19 (pre-mRNA processing factor 19) [NCBI Gene 27339] {aka NMP200, PRP19, PSO4, SNEV, UBOX4, hPSO4}, SRSF5 (serine and arginine rich splicing factor 5) [NCBI Gene 6430] {aka HRS, SFRS5, SRP40}, MAP2 (microtubule associated protein 2) [NCBI Gene 4133] {aka MAP-2, MAP2A, MAP2B, MAP2C}, DDX5 (DEAD-box helicase 5) [NCBI Gene 1655] {aka G17P1, HLR1, HUMP68, p68}, SRSF9 (serine and arginine rich splicing factor 9) [NCBI Gene 8683] {aka SFRS9, SRp30c}, PCBP2 (poly(rC) binding protein 2) [NCBI Gene 5094] {aka HNRNPE2, HNRPE2, hnRNP-E2}, LUC7L3 (LUC7 like 3 pre-mRNA splicing factor) [NCBI Gene 51747] {aka CRA, CREAP-1, CROP, LUC7A, OA48-18, hLuc7A}, RBM20 (RNA binding motif protein 20) [NCBI Gene 282996], HNRNPA1 (heterogeneous nuclear ribonucleoprotein A1) [NCBI Gene 3178] {aka ALS19, ALS20, HNRPA1, HNRPA1L3, IBMPFD3, MPD3}, SRSF11 (serine and arginine rich splicing factor 11) [NCBI Gene 9295] {aka NET2, SFRS11, dJ677H15.2, p54}, TRA2B (transformer 2 beta homolog) [NCBI Gene 6434] {aka Htra2-beta, PPP1R156, RAMELN, SFRS10, SRFS10, TRA2-BETA}, NOVA1 (NOVA alternative splicing regulator 1) [NCBI Gene 4857] {aka Nova-1}, HNRNPU (heterogeneous nuclear ribonucleoprotein U) [NCBI Gene 3192] {aka DEE54, EIEE54, GRIP120, HNRNPU-AS1, HNRPU, SAF-A}, RAVER1 (ribonucleoprotein, PTB binding 1) [NCBI Gene 125950], CELF3 (CUGBP Elav-like family member 3) [NCBI Gene 11189] {aka BRUNOL1, CAGH4, ERDA4, ETR-1, TNRC4}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, EREG (epiregulin) [NCBI Gene 2069] {aka EPR, ER, Ep}, ARL6IP4 (ARF like GTPase 6 interacting protein 4) [NCBI Gene 51329] {aka SFRS20, SR-25, SRp25, SRrp37}, SRSF3 (serine and arginine rich splicing factor 3) [NCBI Gene 6428] {aka SFRS3, SRp20}, RMDN3 (regulator of microtubule dynamics 3) [NCBI Gene 55177] {aka FAM82A2, FAM82C, RMD-3, RMD3, ptpip51}
- **Diseases:** pancreatic disorders (MESH:D010195), FPD (MESH:C563324), FTLD-Tau (MESH:D057174), Cancer (MESH:D009369), neurotoxicity (MESH:D020258), type 1 myotonic dystrophy (MESH:D009223), Breast cancer (MESH:D001943), FTDP-17 (MESH:D057180), chromatin abnormalities (MESH:D000014), chromosome aberrations (MESH:D002869), IBM (MESH:D018979), breast, ovary, prostate, and gastric cancer (MESH:D010051), AS (MESH:C536589), amyloid beta aggregation (MESH:C000718787), glioblastoma (MESH:D005909), corticobasal degeneration (MESH:D000088282), neuroblastoma (MESH:D009447), Tau dysfunction (MESH:C536599), anxiety (MESH:D001007), PD (MESH:D020774), deterioration of cardiovascular function (MESH:D018376), ALS (MESH:D000690), neurofibrillary tangles (MESH:D055956), toxicity (MESH:D064420), AD (MESH:D000544), glucose intolerance (MESH:D018149), neuron degeneration (MESH:D009410), impairment of (MESH:D060825), Tauopathies (MESH:D024801), pheochromocytoma (MESH:D010673), PSP (MESH:D013494), Nervous (MESH:D009422), aneuploidy (MESH:D000782), MTBD (MESH:C567137), neurodegeneration (MESH:D019636)
- **Species:** Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116], Papio hamadryas (baboon, species) [taxon 9557], Pan troglodytes (chimpanzee, species) [taxon 9598], Photinus pyralis (common eastern firefly, species) [taxon 7054], Danio rerio (leopard danio, species) [taxon 7955], Macaca mulatta (rhesus macaque, species) [taxon 9544], Bos taurus (bovine, species) [taxon 9913], Hylobates sp. (gibbon, species) [taxon 9581], Mus musculus (house mouse, species) [taxon 10090], Hylobates lar (common gibbon, species) [taxon 9580]
- **Mutations:** V337M, N279K, deletion at position 280, A152T, P301L, N296H
- **Cell lines:** SH-SY5Y — Homo sapiens (Human), Neuroblastoma, Cancer cell line (CVCL_0019), OVCAR — Homo sapiens (Human), Ovarian carcinoma, Cancer cell line (CVCL_3941), COS — Chlorocebus aethiops (Green monkey), Transformed cell line (CVCL_0223), PC12 — Rattus norvegicus (Rat), Rat adrenal gland pheochromocytoma, Cancer cell line (CVCL_0481), TOV112V — Homo sapiens (Human), Ovarian endometrioid adenocarcinoma, Cancer cell line (CVCL_3612)

## Full text

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## Figures

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## References

157 references — full list in the complete paper: https://tomesphere.com/paper/PMC9735940/full.md

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Source: https://tomesphere.com/paper/PMC9735940