# Pan-cancer analysis on the role of PIK3R1 and PIK3R2 in human tumors

**Authors:** Yane Liu, Duo Wang, Zhijun Li, Xinwei Li, Mengdi Jin, Ningning Jia, Xingyao Cui, Guoyan Hu, Tongyu Tang, Qiong Yu

PMC · DOI: 10.1038/s41598-022-09889-0 · Scientific Reports · 2022-04-08

## TL;DR

This study explores how PIK3R1 and PIK3R2 genes affect cancer across many types, finding their expression patterns and links to survival and immune response.

## Contribution

The paper provides a novel pan-cancer analysis of PIK3R1 and PIK3R2, linking their expression to survival and immune infiltration.

## Key findings

- PIK3R1 is lowly expressed in most tumors, while PIK3R2 is highly expressed.
- Abnormal expression of PIK3R1 and PIK3R2 is linked to poor patient survival.
- Expression levels of both genes correlate with immune infiltration in various cancers.

## Abstract

Phosphoinositide-3-Kinase Regulatory Subunit 1 (PIK3R1) is believed to function as a tumor suppressor, while Phosphoinositide-3-Kinase Regulatory Subunit 2 (PIK3R2) as a tumor driver. However, there is no systematic pan-cancer analysis of them. The pan-cancer study comprehensively investigated the gene expression, genetic alteration, DNA methylation, and prognostic significance of PIK3R1 and PIK3R2 in 33 different tumors based on the TIMER, GEPIA, UALCAN, HPA, cBioPortal, and Kaplan–Meier Plotter database. The results indicated that PIK3R1 is lowly expressed in most tumors while PIK3R2 is highly expressed in most tumors, and abnormal gene expression may be related to promoter methylation. Moreover, not only mutations, downregulation of PIK3R1 and upregulation of PIK3R2 were found to be detrimental to the survival of most cancer patients as well. Furthermore, the expression of both PIK3R1 and PIK3R2 was associated with the level of immune infiltration in multiple tumors, such as breast invasive carcinoma. Our study conducted a comparatively comprehensive analysis of the role of PIK3R1 and PIK3R2 in a variety of cancers, contributing to further study of their potential mechanisms in cancer occurrence and progression. Our findings suggested that PIK3R1 and PIK3R2 could serve as prognostic markers for several cancers.

## Linked entities

- **Genes:** PIK3R1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 5295], PIK3R2 (phosphoinositide-3-kinase regulatory subunit 2) [NCBI Gene 5296]

## Full-text entities

- **Genes:** EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, PIK3R1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 5295] {aka AGM7, GRB1, IMD36, p85, p85-ALPHA, p85alpha}, Akt1 (Akt serine/threonine kinase 1) [NCBI Gene 11651] {aka Akt, LTR-akt, PKB, PKB/Akt, PKBalpha, Rac}, PIK3R2 (phosphoinositide-3-kinase regulatory subunit 2) [NCBI Gene 5296] {aka MPPH, MPPH1, P85B, p85, p85-BETA, p85beta}, TXK (TXK tyrosine kinase) [NCBI Gene 7294] {aka BTKL, PSCTK5, PTK4, RLK, TKL}, PIK3CA (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha) [NCBI Gene 5290] {aka CCM4, CLAPO, CLOVE, CWS5, HMH, MCAP}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, Pik3r2 (phosphoinositide-3-kinase regulatory subunit 2) [NCBI Gene 18709] {aka p85beta}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, PTEN (phosphatase and tensin homolog) [NCBI Gene 5728] {aka 10q23del, BZS, CWS1, DEC, GLM2, MHAM}, MAPK8 (mitogen-activated protein kinase 8) [NCBI Gene 5599] {aka JNK, JNK-46, JNK1, JNK1A2, JNK21B1/2, PRKM8}, ERVK-15 (endogenous retrovirus group K member 15) [NCBI Gene 100616443] {aka P1.10, c7_C}, Pik3r1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 18708] {aka PI3K, p50alpha, p55alpha, p85alpha}, BRCA1 (BRCA1 DNA repair associated) [NCBI Gene 672] {aka BRCAI, BRCC1, BROVCA1, FANCS, IRIS, PNCA4}
- **Diseases:** GBM (MESH:D005909), PRAD (MESH:D000230), BLCA (MESH:D001749), MESO (MESH:D008654), lung metastasis (MESH:D009362), carcinogenesis (MESH:D063646), PAAD (MESH:D010190), DLBC (MESH:D016403), STAD (MESH:D013274), SARC (MESH:D012509), head and neck cancer (MESH:D006258), testis cancer (MESH:D013736), ovarian cancer (MESH:D010051), UCEC (MESH:D016889), KIRC (MESH:D002292), cervical cancer (MESH:D002583), LUAD (MESH:D000077192), ICP (MESH:D007154), COAD (MESH:D003110), Breast invasive carcinoma (MESH:D001943), HNSC (MESH:D000077195), Cervical squamous cell carcinoma (MESH:D002294), Cancer (MESH:D009369), renal cancer (MESH:D007680), THCA (MESH:D013964), UVM (MESH:C536494), Brain Lower (MESH:D001927), ACC (MESH:D018268), Ovarian serous cystadenocarcinoma (MESH:D010049), PPS (MESH:C562509), BP (MESH:D021081), CC (MESH:C566443), UCS (MESH:D002296), Glioma (MESH:D005910), PCPG (MESH:D010673), CHOL (MESH:D018281), skin cancer (MESH:D012878), Acute Myeloid Leukemia (MESH:D015470), LIHC (MESH:D006528), MF (MESH:C567116), TGCT (MESH:C563236), ESCA (MESH:D004938), lung cancer (MESH:D008175), KICH (MESH:D007674), READ (MESH:D012004), SKCM (MESH:C562393)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** G37R
- **Cell lines:** READ — Homo sapiens (Human), Rectal adenocarcinoma, Cancer cell line (CVCL_E054), UCEC — Homo sapiens (Human), Endometrial carcinoma, Cancer cell line (CVCL_W380), PRAD — Homo sapiens (Human), Finite cell line (CVCL_0061), SKCM — Canis lupus familiaris (Dog), Canine mastocytoma, Cancer cell line (CVCL_WH42), HNSC — Homo sapiens (Human), Laryngeal squamous cell carcinoma, Cancer cell line (CVCL_S890), S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), ESCA — Homo sapiens (Human), Esophageal squamous cell carcinoma, Cancer cell line (CVCL_VH05), THYM — Mus musculus (Mouse), Mouse lymphoma, Cancer cell line (CVCL_2Z87), COAD — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_HE31), CHOL — Homo sapiens (Human), Cholangiocarcinoma, Cancer cell line (CVCL_4Z42), BLCA — Homo sapiens (Human), Bladder carcinoma, Cancer cell line (CVCL_2743), THCA — Homo sapiens (Human), Thyroid gland papillary carcinoma, Cancer cell line (CVCL_6308)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC8993854/full.md

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC8993854/full.md

## References

29 references — full list in the complete paper: https://tomesphere.com/paper/PMC8993854/full.md

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Source: https://tomesphere.com/paper/PMC8993854