# Metabolomic changes in animal models of depression: a systematic analysis

**Authors:** Juncai Pu, Yiyun Liu, Siwen Gui, Lu Tian, Yue Yu, Xuemian Song, Xiaogang Zhong, Xiaopeng Chen, Weiyi Chen, Peng Zheng, Hanping Zhang, Xue Gong, Lanxiang Liu, Jing Wu, Haiyang Wang, Peng Xie

PMC · DOI: 10.1038/s41380-021-01269-w · Molecular Psychiatry · 2021-09-01

## TL;DR

This study identifies consistently altered metabolites in animal models of depression across brain, blood, and urine, highlighting key changes in neurotransmitters and energy metabolism.

## Contribution

The study systematically identifies reproducible metabolomic changes in depression models using vote counting analysis of 241 studies.

## Key findings

- Serotonin, dopamine, and GABA are consistently downregulated in the brain of depression models.
- Blood and urine show decreased amino acids and imbalanced energy metabolism in depression models.
- Kynurenine metabolites and corticosterone are upregulated in brain and blood, respectively.

## Abstract

Extensive research has been carried out on the metabolomic changes in animal models of depression; however, there is no general agreement about which metabolites exhibit constant changes. Therefore, the aim of this study was to identify consistently altered metabolites in large-scale metabolomics studies of depression models. We performed vote counting analyses to identify consistently upregulated or downregulated metabolites in the brain, blood, and urine of animal models of depression based on 3743 differential metabolites from 241 animal metabolomics studies. We found that serotonin, dopamine, gamma-aminobutyric acid, norepinephrine, N-acetyl-L-aspartic acid, anandamide, and tryptophan were downregulated in the brain, while kynurenine, myo-inositol, hydroxykynurenine, and the kynurenine to tryptophan ratio were upregulated. Regarding blood metabolites, tryptophan, leucine, tyrosine, valine, trimethylamine N-oxide, proline, oleamide, pyruvic acid, and serotonin were downregulated, while N-acetyl glycoprotein, corticosterone, and glutamine were upregulated. Moreover, citric acid, oxoglutaric acid, proline, tryptophan, creatine, betaine, L-dopa, palmitic acid, and pimelic acid were downregulated, and hippuric acid was upregulated in urine. We also identified consistently altered metabolites in the hippocampus, prefrontal cortex, serum, and plasma. These findings suggested that metabolomic changes in depression models are characterized by decreased neurotransmitter and increased kynurenine metabolite levels in the brain, decreased amino acid and increased corticosterone levels in blood, and imbalanced energy metabolism and microbial metabolites in urine. This study contributes to existing knowledge of metabolomic changes in depression and revealed that the reproducibility of candidate metabolites was inadequate in previous studies.

## Linked entities

- **Chemicals:** serotonin (PubChem CID 5202), dopamine (PubChem CID 681), gamma-aminobutyric acid (PubChem CID 119), norepinephrine (PubChem CID 951), N-acetyl-L-aspartic acid (PubChem CID 65065), anandamide (PubChem CID 5281969), tryptophan (PubChem CID 1148), kynurenine (PubChem CID 846), myo-inositol (PubChem CID 892), hydroxykynurenine (PubChem CID 89), leucine (PubChem CID 857), tyrosine (PubChem CID 1153), valine (PubChem CID 1182), trimethylamine N-oxide (PubChem CID 1145), proline (PubChem CID 614), oleamide (PubChem CID 5283387), pyruvic acid (PubChem CID 1060), corticosterone (PubChem CID 5753), glutamine (PubChem CID 738), citric acid (PubChem CID 311), oxoglutaric acid (PubChem CID 51), betaine (PubChem CID 247), L-dopa (PubChem CID 6047), palmitic acid (PubChem CID 985), pimelic acid (PubChem CID 385), hippuric acid (PubChem CID 464)
- **Diseases:** depression (MONDO:0002050)

## Full-text entities

- **Genes:** NLRP2 (NLR family pyrin domain containing 2) [NCBI Gene 55655] {aka CLR19.9, NALP2, NBS1, OZEMA18, PAN1, PYPAF2}, FGB (fibrinogen beta chain) [NCBI Gene 2244] {aka HEL-S-78p}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, CRP (C-reactive protein) [NCBI Gene 1401] {aka PTX1}
- **Diseases:** hyperactivity of the hypothalamus (MESH:D007029), CMS (MESH:D000079225), adrenal (MESH:D000310), inflammation (MESH:D007249), MDD (MESH:D003865), Depression (MESH:D003866), neurotoxicity (MESH:D020258), weight loss (MESH:D015431), mental disability (MESH:D001523)
- **Chemicals:** anandamide (MESH:C078814), pyruvic acid (MESH:D019289), AMP adenosine monophosphate (MESH:D000249), endocannabinoid (MESH:D063388), lysophosphatidylcholine (MESH:D008244), N-acetyl-L-aspartic acid (MESH:C000179), LysoPC (MESH:C006065), amino acid (MESH:D000596), oleamide (MESH:C029407), Hippuric acid (MESH:C030514), corticosterone (MESH:D003345), 5-HIAA (MESH:D006897), trimethylamine N-oxide (MESH:C005855), norepinephrine (MESH:D009638), branched-chain amino acids (MESH:D000597), GABA (MESH:D005680), Citric acid (MESH:D019343), proline (MESH:D011392), ATP (MESH:D000255), myo-inositol (MESH:D007294), Kynurenine (MESH:D007737), L-dopa (MESH:D007980), MG monoacylglycerol (-), betaine (MESH:D001622), Leucine (MESH:D007930), creatine (MESH:D003401), pimelic acid (MESH:D010867), epinephrine (MESH:D004837), glutamine (MESH:D005973), dopamine (MESH:D004298), Tryptophan (MESH:D014364), valine (MESH:D014633), glutamic acid (MESH:D018698), tyrosine (MESH:D014443), palmitic acid (MESH:D019308), serotonin (MESH:D012701), isoleucine (MESH:D007532)
- **Species:** Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC8872989/full.md

## References

61 references — full list in the complete paper: https://tomesphere.com/paper/PMC8872989/full.md

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Source: https://tomesphere.com/paper/PMC8872989