# Neuronal Nsun2 deficiency produces tRNA epitranscriptomic alterations and proteomic shifts impacting synaptic signaling and behavior

**Authors:** J. Blaze, A. Navickas, H. L. Phillips, S. Heissel, A. Plaza-Jennings, S. Miglani, H. Asgharian, M. Foo, C. D. Katanski, C. P. Watkins, Z. T. Pennington, B. Javidfar, S. Espeso-Gil, B. Rostandy, H. Alwaseem, C. G. Hahn, H. Molina, D. J. Cai, T. Pan, W. D. Yao, H. Goodarzi, F. Haghighi, S. Akbarian

PMC · DOI: 10.1038/s41467-021-24969-x · Nature Communications · 2021-08-13

## TL;DR

This study shows how changes in tRNA methylation affect brain proteins and behaviors like fear memory in mice.

## Contribution

The study reveals a novel link between tRNA epitranscriptomic modifications and synaptic signaling in the prefrontal cortex.

## Key findings

- Nsun2 deficiency reduces tRNA m5C levels and impairs glycine isodecoder expression.
- Loss of glycine-rich proteins disrupts glutamatergic signaling and contextual fear memory.
- Neuronal Nsun2 deficiency increases glycine biosynthesis by 146%.

## Abstract

Epitranscriptomic mechanisms linking tRNA function and the brain proteome to cognition and complex behaviors are not well described. Here, we report bi-directional changes in depression-related behaviors after genetic disruption of neuronal tRNA cytosine methylation, including conditional ablation and transgene-derived overexpression of Nsun2 in the mouse prefrontal cortex (PFC). Neuronal Nsun2-deficiency was associated with a decrease in tRNA m5C levels, resulting in deficits in expression of 70% of tRNAGly isodecoders. Altogether, 1488/5820 proteins changed upon neuronal Nsun2-deficiency, in conjunction with glycine codon-specific defects in translational efficiencies. Loss of Gly-rich proteins critical for glutamatergic neurotransmission was associated with impaired synaptic signaling at PFC pyramidal neurons and defective contextual fear memory. Changes in the neuronal translatome were also associated with a 146% increase in glycine biosynthesis. These findings highlight the methylation sensitivity of glycinergic tRNAs in the adult PFC. Furthermore, they link synaptic plasticity and complex behaviors to epitranscriptomic modifications of cognate tRNAs and the proteomic homeostasis associated with specific amino acids.

The link between tRNA modifications, protein translation, and behavior is unclear. Here, the authors show that neuronal Nsun2 deficiency results in codon-specific epitranscriptomic changes of Gly-tRNAs and proteomic changes affecting synaptic signaling and behavior in mice.

## Linked entities

- **Genes:** NSUN2 (NOP2/Sun RNA methyltransferase 2) [NCBI Gene 54888]
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Dlg4 (discs large MAGUK scaffold protein 4) [NCBI Gene 13385] {aka Dlgh4, PSD-95, PSD95, SAP90, SAP90A}, Nrgn (neurogranin) [NCBI Gene 64011] {aka 0710001B06Rik, NG, NG/RC3, Pss1, RC3}, Nptxr (neuronal pentraxin receptor) [NCBI Gene 73340] {aka 1200009K17Rik, 1700036C17Rik, 5730406O18Rik, D15Bwg0580e, NPR, Npcd}, Camk2a (calcium/calmodulin-dependent protein kinase II alpha) [NCBI Gene 12322] {aka CaMKII, mKIAA0968}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, Hpd (4-hydroxyphenylpyruvic acid dioxygenase) [NCBI Gene 15445] {aka 4HPPD, Fla, Flp, Hppd, Laf}, Nsun2 (NOL1/NOP2/Sun domain family member 2) [NCBI Gene 28114] {aka D13Wsu123e, Misu}, Psph (phosphoserine phosphatase) [NCBI Gene 100678] {aka PSP, PSPase}, TRNG (tRNA-Gly) [NCBI Gene 4563] {aka MTTG}, Prkcg (protein kinase C, gamma) [NCBI Gene 18752] {aka PKCgamma, Pkcc, Prkcc}, Nop2 (NOP2 nucleolar protein) [NCBI Gene 110109] {aka 120kDa, A530002O17, Nol1}, CAMK2G (calcium/calmodulin dependent protein kinase II gamma) [NCBI Gene 818] {aka CAMK, CAMK-II, CAMKG, MRD59}, Trdmt1 (tRNA aspartic acid methyltransferase 1) [NCBI Gene 13434] {aka Dnmt2, Rnmt2, m.MmuIIP, met-2}, Cacng8 (calcium channel, voltage-dependent, gamma subunit 8) [NCBI Gene 81905], Phgdh (3-phosphoglycerate dehydrogenase) [NCBI Gene 236539] {aka 3-PGDH, 3PGDH, 4930479N23, A10, PGAD, PGD}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 14433] {aka Gapd}, Srr (serine racemase) [NCBI Gene 27364] {aka M100034, Rgsc34, Srs}, Shmt2 (serine hydroxymethyltransferase 2 (mitochondrial)) [NCBI Gene 108037] {aka 2700043D08Rik, SHMT}, Syngr3 (synaptogyrin 3) [NCBI Gene 20974], TrnI (tRNA-Ile) [NCBI Gene 17733], Psat1 (phosphoserine aminotransferase 1) [NCBI Gene 107272] {aka D8Ertd814e, EPIP, PSA, Psat}, Syp (synaptophysin) [NCBI Gene 20977] {aka A230093K24Rik, Syn, p38}, H3c7 (H3 clustered histone 7) [NCBI Gene 260423] {aka H3.2-221, H3c13, H3c14, H3c15, H3c2, H3c3}, NSUN2 (NOP2/Sun RNA methyltransferase 2) [NCBI Gene 54888] {aka MISU, MRT5, SAKI, TRM4}, Gria2 (glutamate receptor, ionotropic, AMPA2 (alpha 2)) [NCBI Gene 14800] {aka GluA2, GluR-B, Glur-2, Glur2, gluR-K2}, n-TRtct5 (nuclear encoded tRNA arginine 5 (anticodon TCT)) [NCBI Gene 102467638] {aka n-Tr20}
- **Diseases:** acute lymphoblastic T-cell leukemia (MESH:D054218), memory (MESH:D008569), depressive behaviors (MESH:D011596), health abnormalities (MESH:D000071069), behavioral despair (MESH:D001523), depressant (MESH:D003866), anxiety (MESH:D001007), neurological abnormalities (MESH:D009461), cognitive decline (MESH:D003072), facial dysmorphism (MESH:C565579), ACC (MESH:D017034), Neuronal Nsun2-deficiency (MESH:D009410), distal myopathy (MESH:D049310), frontal lobe dysfunction (MESH:D001927), ID (MESH:D008607)
- **Species:** Homo sapiens (human, species) [taxon 9606], Rattus norvegicus (brown rat, species) [taxon 10116], Drosophila melanogaster (fruit fly, species) [taxon 7227], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** glycine-serine, c.1020delA
- **Cell lines:** C39 — Homo sapiens (Human), Floor of mouth squamous cell carcinoma, Cancer cell line (CVCL_WI16), C57BL/6N — Mus musculus (Mouse), Embryonic stem cell (CVCL_2H81), C57B6 — Mus musculus (Mouse), Finite cell line (CVCL_A9HH), C57BL/6J — Mus musculus (Mouse), Transformed cell line (CVCL_C0MW)

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC8363735/full.md

## References

87 references — full list in the complete paper: https://tomesphere.com/paper/PMC8363735/full.md

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Source: https://tomesphere.com/paper/PMC8363735