# The developing mouse coronal suture at single-cell resolution

**Authors:** D’Juan T. Farmer, Hana Mlcochova, Yan Zhou, Nils Koelling, Guanlin Wang, Neil Ashley, Helena Bugacov, Hung-Jhen Chen, Riana Parvez, Kuo-Chang Tseng, Amy E. Merrill, Robert E. Maxson, Andrew O. M. Wilkie, J. Gage Crump, Stephen R. F. Twigg

PMC · DOI: 10.1038/s41467-021-24917-9 · Nature Communications · 2021-08-10

## TL;DR

This study maps the cellular makeup of the developing mouse coronal suture to better understand its role in skull growth and craniosynostosis.

## Contribution

The study provides a single-cell atlas of the embryonic mouse coronal suture, revealing distinct cell populations and their roles.

## Key findings

- Distinct pre-osteoblast signatures were found between bone fronts and the periosteum.
- A ligament-like population above the suture persists into adulthood.
- An embryonic Six2+ osteoprogenitor population contributes to postnatal suture mesenchyme.

## Abstract

Sutures separate the flat bones of the skull and enable coordinated growth of the brain and overlying cranium. The coronal suture is most commonly fused in monogenic craniosynostosis, yet the unique aspects of its development remain incompletely understood. To uncover the cellular diversity within the murine embryonic coronal suture, we generated single-cell transcriptomes and performed extensive expression validation. We find distinct pre-osteoblast signatures between the bone fronts and periosteum, a ligament-like population above the suture that persists into adulthood, and a chondrogenic-like population in the dura mater underlying the suture. Lineage tracing reveals an embryonic Six2+ osteoprogenitor population that contributes to the postnatal suture mesenchyme, with these progenitors being preferentially affected in a Twist1+/−; Tcf12+/− mouse model of Saethre-Chotzen Syndrome. This single-cell atlas provides a resource for understanding the development of the coronal suture and the mechanisms for its loss in craniosynostosis.

The development of the coronal suture remains incompletely understood. Here the authors perform scRNA-seq and expression validation to uncover the cellular diversity within the murine embryonic coronal suture, thus revealing possible mechanisms for its loss in craniosynostosis.

## Linked entities

- **Genes:** SIX2 (SIX homeobox 2) [NCBI Gene 10736], TWIST1 (twist family bHLH transcription factor 1) [NCBI Gene 7291], TCF12 (transcription factor 12) [NCBI Gene 6938]
- **Diseases:** Saethre-Chotzen Syndrome (MONDO:0007042), craniosynostosis (MONDO:0015469)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** CDC45 (cell division cycle 45) [NCBI Gene 8318] {aka CDC45L, CDC45L2, MGORS7, PORC-PI-1}, MYL9 (myosin light chain 9) [NCBI Gene 10398] {aka LC20, MLC-2C, MLC2, MMIHS4, MRLC1, MYRL2}, Prrx1 (paired related homeobox 1) [NCBI Gene 18933] {aka A230024N07Rik, K-2, MHox1, Pmx, Pmx1, Prx1}, FGFR2 (fibroblast growth factor receptor 2) [NCBI Gene 2263] {aka BBDS, BEK, BFR-1, CD332, CEK3, CFD1}, Bglap (bone gamma carboxyglutamate protein) [NCBI Gene 12096] {aka BGP, Bglap1, OC, OG1, mOC-A}, Wnt9a (wingless-type MMTV integration site family, member 9A) [NCBI Gene 216795] {aka Wnt14, wnt-14}, C1QTNF3 (C1q and TNF related 3) [NCBI Gene 114899] {aka C1ATNF3, CORCS, CORS, CORS-26, CORS26, CTRP3}, Aldh1a2 (aldehyde dehydrogenase family 1, subfamily A2) [NCBI Gene 19378] {aka Aldh1a7, Raldh1, Raldh2}, Cd200 (Cd200 molecule) [NCBI Gene 24560] {aka Cspmo2, MRCOX2, Mox2}, FGFR1 (fibroblast growth factor receptor 1) [NCBI Gene 2260] {aka BFGFR, CD331, CEK, ECCL, FGFBR, FGFR-1}, KRT90P (keratin 90, pseudogene) [NCBI Gene 85340] {aka HBA, KRT124P, KRTHBP1}, Tac1 (tachykinin 1) [NCBI Gene 21333] {aka 4930528L02Rik, NK-1, NK1, Nkna, PPT-A, PPTA}, HBB (hemoglobin subunit beta) [NCBI Gene 3043] {aka CD113t-C, ECYT6, beta-globin}, Gja1 (gap junction protein, alpha 1) [NCBI Gene 14609] {aka Cnx43, Cx43, Cx43alpha1, Cxnk1, Gja-1, Npm1}, Cldn11 (claudin 11) [NCBI Gene 18417] {aka Claudin-11, Claudin11, Osp, Otm}, Jag1 (jagged 1) [NCBI Gene 16449] {aka ABE2, Gena228, Gsfabe2, Htu, Ozz, Ser-1}, MATN4 (matrilin 4) [NCBI Gene 8785], SCX (scleraxis bHLH transcription factor) [NCBI Gene 642658] {aka SCXA, SCXB, bHLHa48}, UBE2K (ubiquitin conjugating enzyme E2 K) [NCBI Gene 3093] {aka E2-25K, HIP2, HYPG, LIG, UBC1}, COL2A1 (collagen type II alpha 1 chain) [NCBI Gene 1280] {aka ACG2, ANFH, ANFH1, AOM, COL11A3, EDMMD}, Fzd1 (frizzled class receptor 1) [NCBI Gene 14362] {aka FZ-1, Fz1}, SP7 (Sp7 transcription factor) [NCBI Gene 121340] {aka OI11, OI12, OSX, osterix}, TAC1 (tachykinin precursor 1) [NCBI Gene 6863] {aka Hs.2563, NK2, NKNA, NPK, TAC2}, ACTA2 (actin alpha 2, smooth muscle) [NCBI Gene 59] {aka ACTSA, SMDYS}, Igf1 (insulin-like growth factor 1) [NCBI Gene 16000] {aka C730016P09Rik, Igf-1, Igf-I}, Tgfbr3 (transforming growth factor, beta receptor III) [NCBI Gene 21814] {aka 1110036H20Rik, TBRIII}, Six2 (sine oculis-related homeobox 2) [NCBI Gene 20472], Sp7 (Sp7 transcription factor 7) [NCBI Gene 170574] {aka 6430578P22Rik, C22, Osx}, Fgf2 (fibroblast growth factor 2) [NCBI Gene 14173] {aka Fgf-2, Fgf2a, Fgfb, bFGF}, Pi16 (peptidase inhibitor 16) [NCBI Gene 74116] {aka 1200009H11Rik, Cripi, PI-16}, ERG (ETS transcription factor ERG) [NCBI Gene 2078] {aka LMPHM14, erg-3, p55}, Fzd6 (frizzled class receptor 6) [NCBI Gene 14368] {aka Fz6, rst}, TNMD (tenomodulin) [NCBI Gene 64102] {aka BRICD4, CHM1L, TEM}, Fzd2 (frizzled class receptor 2) [NCBI Gene 57265] {aka Fz10, Fzd10, Mfz10, Mfz10a}, TCF12 (transcription factor 12) [NCBI Gene 6938] {aka CRS3, HEB, HH26, HTF4, HsT17266, TCF-12}, Dlx6 (distal-less homeobox 6) [NCBI Gene 13396], Npnt (nephronectin) [NCBI Gene 114249] {aka 1110009H02Rik, Nctn, POEM}, Twist1 (twist basic helix-loop-helix transcription factor 1) [NCBI Gene 22160] {aka M-Twist, Pde, Ska10, Ska<m10Jus>, Twist, bHLHa38}, MMP13 (matrix metallopeptidase 13) [NCBI Gene 4322] {aka CLG3, MANDP1, MDST, MMP-13}, Tgfb2 (transforming growth factor, beta 2) [NCBI Gene 21808] {aka Tgf-beta2, Tgfb-2}, Myc (Myc proto-oncogene, bHLH transcription factor) [NCBI Gene 17869] {aka Myc2, Niard, Nird, bHLHe39}, Pthlh (parathyroid hormone-like peptide) [NCBI Gene 19227] {aka PLP, PTH-like, Pthrp}, BGN (biglycan) [NCBI Gene 633] {aka DSPG1, MRLS, PG-S1, PGI, SEMDX, SLRR1A}, ACAN (aggrecan) [NCBI Gene 176] {aka AGC1, AGCAN, CSPG1, CSPGCP, MSK16, SEDK}, Sun1 (Sad1 and UNC84 domain containing 1) [NCBI Gene 77053] {aka 4632417G13Rik, 5730434D03Rik, Unc84a, mKIAA0810}, THBS2 (thrombospondin 2) [NCBI Gene 7058] {aka EDSCLL3, TSP2}, Grem1 (gremlin 1, DAN family BMP antagonist) [NCBI Gene 23892] {aka Cktsf1b1, Drm, Grem, ld}, Fgf18 (fibroblast growth factor 18) [NCBI Gene 14172] {aka D130055P09Rik, FGF-18, Fgf6a}, Dlx5 (distal-less homeobox 5) [NCBI Gene 13395], IFITM5 (interferon induced transmembrane protein 5) [NCBI Gene 387733] {aka BRIL, DSPA1, Hrmp1, OI5, fragilis4}, Podnl1 (podocan-like 1) [NCBI Gene 244550] {aka 5832418A03Rik, Gm506}, Pdgfa (platelet derived growth factor, alpha) [NCBI Gene 18590] {aka PDGF-1}, Tbx18 (T-box18) [NCBI Gene 76365] {aka 2810012F10Rik, 2810404D13Rik}, Ptch1 (patched 1) [NCBI Gene 19206] {aka A230106A15Rik, Ptc, Ptc1, Ptch, mes, wig}, Dmp1 (dentin matrix acidic phosphoprotein 1) [NCBI Gene 25312] {aka AG1, DENTMAT, DMP-1}, CTSK (cathepsin K) [NCBI Gene 1513] {aka CTS02, CTSO, CTSO1, CTSO2, PKND, PYCD}, Gt(ROSA)26Sor (gene trap ROSA 26, Philippe Soriano) [NCBI Gene 14910] {aka Gtrgeo26, Gtrosa26, R26, ROSA26, Thumpd3as1}, Tgfb3 (transforming growth factor, beta 3) [NCBI Gene 21809] {aka TGF-beta-3, Tgfb-3}, Dpt (dermatopontin) [NCBI Gene 56429] {aka 1810032B19Rik, 5033416F05Rik, EQ-1, Eq1}, Col1a1 (collagen, type I, alpha 1) [NCBI Gene 12842] {aka Col1a-1, Cola-1, Cola1, Mov-13, Mov13}
- **Diseases:** Saethre-Chotzen Syndrome (MESH:D000168), Synostosis (MESH:D013580), ectopic cartilage formation (MESH:D000072717), HD (MESH:D006816), birth defect (MESH:D000014), DM (MESH:D009223), Coronal synostosis (MESH:D003398)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Rattus norvegicus (brown rat, species) [taxon 10116], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU), OG4 — Homo sapiens (Human), Cervical squamous cell carcinoma, not otherwise specified, Cancer cell line (CVCL_JF81), MG1 — Trichoplusia ni (Cabbage looper), Spontaneously immortalized cell line (CVCL_Z093), E17.5 — Mus musculus (Mouse), Hybridoma (CVCL_B5A6), C63D9 — Homo sapiens (Human), Spontaneously immortalized cell line (CVCL_DF68), Ai9 — Homo sapiens (Human), Induced pluripotent stem cell (CVCL_LE85)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC8355337/full.md

## References

73 references — full list in the complete paper: https://tomesphere.com/paper/PMC8355337/full.md

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Source: https://tomesphere.com/paper/PMC8355337