# Transcriptomic Profiling of Human Placenta in Gestational Diabetes Mellitus at the Single-Cell Level

**Authors:** Yuqi Yang, Fang Guo, Yue Peng, Rong Chen, Wenbo Zhou, Huihui Wang, Jun OuYang, Bin Yu, Zhengfeng Xu

PMC · DOI: 10.3389/fendo.2021.679582 · Frontiers in Endocrinology · 2021-05-07

## TL;DR

This study uses single-cell RNA sequencing to explore placental changes in gestational diabetes, revealing new insights into its molecular causes.

## Contribution

The study provides a detailed single-cell transcriptomic atlas of the human placenta in gestational diabetes mellitus.

## Key findings

- A comprehensive cell atlas of the placenta was constructed, identifying cell subtypes and subtype-specific marker genes.
- Placental cellular functions and intercellular interactions were analyzed in the context of GDM.
- The findings offer new insights into the molecular mechanisms underlying GDM.

## Abstract

Gestational diabetes mellitus (GDM) is associated with an increased risk of adverse pregnancy outcomes. Increasing evidence shows that placentation defects may play important roles in GDM. However, our understanding of the human placenta remains limited. In this study, we generated a comprehensive transcriptomic profile of cellular signatures and transcriptomes in the human placenta in GDM using single-cell RNA sequencing (scRNA-seq), constructed a comprehensive cell atlas, and identified cell subtypes and subtype-specific marker genes. In addition, we investigated the placental cellular function and intercellular interactions in GDM. These findings help to elucidate the molecular mechanisms of GDM, and may facilitate the development of new approaches to GDM treatment and prevention.

## Linked entities

- **Diseases:** Gestational diabetes mellitus (MONDO:0005406)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** CCNB2 (cyclin B2) [NCBI Gene 9133] {aka HsT17299}, CXCR6 (C-X-C motif chemokine receptor 6) [NCBI Gene 10663] {aka BONZO, CD186, CDw186, STRL33, TYMSTR}, ADGRE5 (adhesion G protein-coupled receptor E5) [NCBI Gene 976] {aka CD97, TM7LN1}, MMP8 (matrix metallopeptidase 8) [NCBI Gene 4317] {aka CLG1, HNC, MMP-8, PMNL-CL}, XCL2 (X-C motif chemokine ligand 2) [NCBI Gene 6846] {aka SCM-1b, SCM1B, SCYC2}, FCER2 (Fc epsilon receptor II) [NCBI Gene 2208] {aka BLAST-2, CD23, CD23A, CLEC4J, FCE2, FCErII}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576] {aka GCP-1, GCP1, IL8, LECT, LUCT, LYNAP}, CD8B (CD8 subunit beta) [NCBI Gene 926] {aka CD8B1, CD8beta, LEU2, LY3, LYT3, Ly-3}, FCGR3A (Fc gamma receptor IIIa) [NCBI Gene 2214] {aka CD16-II, CD16A, FCG3, FCGR3, FCRIIIA, FcGRIIIA}, GIMAP2 (GTPase, IMAP family member 2) [NCBI Gene 26157] {aka HIMAP2, IAN12, IMAP2}, SPP1 (secreted phosphoprotein 1) [NCBI Gene 6696] {aka BNSP, BSPI, ETA-1, OPN}, CYP19A1 (cytochrome P450 family 19 subfamily A member 1) [NCBI Gene 1588] {aka ARO, ARO1, CPV1, CYAR, CYP19, CYPXIX}, HLA-DRA (major histocompatibility complex, class II, DR alpha) [NCBI Gene 3122] {aka HLA-DRA1}, Act79B (Actin 79B) [NCBI Gene 40444] {aka 143060_f_at, ACT4, Actin, ArpF, CG7478, D}, CD209 (CD209 molecule) [NCBI Gene 30835] {aka CDSIGN, CLEC4L, DC-SIGN, DC-SIGN1, hDC-SIGN}, TRBC2 (T cell receptor beta constant 2) [NCBI Gene 28638] {aka TCRBC2}, SLTM (SAFB like transcription modulator) [NCBI Gene 79811] {aka Met}, ITGAM (integrin subunit alpha M) [NCBI Gene 3684] {aka CD11B, CR3A, HNA-4, MAC-1, MAC1A, MO1A}, CLEC12A (C-type lectin domain family 12 member A) [NCBI Gene 160364] {aka CD371, CLL-1, CLL1, DCAL-2, MICL, hKLRL1}, XCL1 (X-C motif chemokine ligand 1) [NCBI Gene 6375] {aka ATAC, LPTN, LTN, SCM-1, SCM-1a, SCM1}, ERVFRD-1 (endogenous retrovirus group FRD member 1, envelope) [NCBI Gene 405754] {aka ERVFRDE1, GLLL6191, HERV-FRD, HERV-W/FRD, UNQ6191, envFRD}, LGALS13 (galectin 13) [NCBI Gene 29124] {aka GAL13, PLAC8, PP13}, CDH1 (cadherin 1) [NCBI Gene 999] {aka Arc-1, BCDS1, CD324, CDHE, ECAD, LCAM}, SAMD3 (sterile alpha motif domain containing 3) [NCBI Gene 154075], CD79A (CD79a molecule) [NCBI Gene 973] {aka IGA, IGAlpha, MB-1, MB1}, PAPPA2 (pappalysin 2) [NCBI Gene 60676] {aka PAPP-A2, PAPP-E, PAPPE, PLAC3, SSDA}, CD79B (CD79b molecule) [NCBI Gene 974] {aka AGM6, B29, IGB, Igbeta}, MME (membrane metalloendopeptidase) [NCBI Gene 4311] {aka CALLA, CD10, CMT2T, NEP, SCA43, SFE}, CD80 (CD80 molecule) [NCBI Gene 941] {aka B7, B7-1, B7.1, BB1, CD28LG, CD28LG1}, HLA-G (major histocompatibility complex, class I, G) [NCBI Gene 3135] {aka MHC-G}, CD3D (CD3 delta subunit of T-cell receptor complex) [NCBI Gene 915] {aka CD3-DELTA, CD3DELTA, IMD19, T3D}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, DEFA4 (defensin alpha 4) [NCBI Gene 1669] {aka DEF4, HNP-4, HP-4, HP4}, CD55 (CD55 molecule (Cromer blood group)) [NCBI Gene 1604] {aka CHAPLE, CR, CROM, DAF, TC}, ANPEP (alanyl aminopeptidase, membrane) [NCBI Gene 290] {aka AP-M, AP-N, APN, CD13, GP150, LAP1}, EREG (epiregulin) [NCBI Gene 2069] {aka EPR, ER, Ep}, FLT1 (fms related receptor tyrosine kinase 1) [NCBI Gene 2321] {aka FLT, FLT-1, VEGFR-1, VEGFR1}, NRP2 (neuropilin 2) [NCBI Gene 8828] {aka NP2, NPN2, PRO2714, VEGF165R2}, GZMA (granzyme A) [NCBI Gene 3001] {aka CTLA3, HFSP}, CD3G (CD3 gamma subunit of T-cell receptor complex) [NCBI Gene 917] {aka CD3-GAMMA, CD3GAMMA, IMD17, T3G}, INSL4 (insulin like 4) [NCBI Gene 3641] {aka EPIL, PLACENTIN}, Notum (notum) [NCBI Gene 39751] {aka CG13076, Dmel\CG13076, Not, Nt, Wf, anon-WO0118547.482}, CEACAM8 (CEA cell adhesion molecule 8) [NCBI Gene 1088] {aka CD66b, CD67, CGM6, NCA-95}, ACKR2 (atypical chemokine receptor 2) [NCBI Gene 1238] {aka CCBP2, CCR10, CCR9, CMKBR9, D6, hD6}, CD300E (CD300e molecule) [NCBI Gene 342510] {aka CD300LE, CLM-2, CLM2, CMRF35-A5, IREM-2, IREM2}, CD244 (CD244 molecule) [NCBI Gene 51744] {aka 2B4, NAIL, NKR2B4, Nmrk, SLAMF4}, srp (serpent) [NCBI Gene 41944] {aka A7.1, ABF, Abf, CG3992, DmGATAb, Dmel\CG3992}, MMP2 (matrix metallopeptidase 2) [NCBI Gene 4313] {aka CLG4, CLG4A, MMP-2, MMP-II, MONA, TBE-1}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, PARP1 (poly(ADP-ribose) polymerase 1) [NCBI Gene 142] {aka ADPRT, ADPRT 1, ADPRT1, ARTD1, PARP, PARP-1}, SLC1A2 (solute carrier family 1 member 2) [NCBI Gene 6506] {aka DEE41, EAAT2, EIEE41, GLT-1, GLT1, HBGT}, MMP11 (matrix metallopeptidase 11) [NCBI Gene 4320] {aka SL-3, ST3, STMY3}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, CD163 (CD163 molecule) [NCBI Gene 9332] {aka M130, MM130, SCARI1}, AIF1 (allograft inflammatory factor 1) [NCBI Gene 199] {aka AIF-1, IBA1, IRT-1, IRT1}, CD44 (CD44 molecule (IN blood group)) [NCBI Gene 960] {aka CDW44, CSPG8, ECM-III, ECMR-III, H-CAM, HCELL}, ADRB1 (adrenoceptor beta 1) [NCBI Gene 153] {aka ADRB1R, B1AR, BETA1AR, FNSS2, RHR}, CAMP (cathelicidin antimicrobial peptide) [NCBI Gene 820] {aka CAP-18, CAP18, CRAMP, FALL-39, FALL39, HSD26}, VEGFB (vascular endothelial growth factor B) [NCBI Gene 7423] {aka VEGFL, VRF}
- **Diseases:** dysfunction (MESH:D006331), Hyperglycemic (MESH:D006944), hyperglycemia (MESH:D006943), VCT (MESH:D018253), GDM (MESH:D016640), fetal distress (MESH:D005316), obesity (MESH:D009765), preterm birth (MESH:D047928), pregnancy-associated diseases (MESH:D020150), Diabetes in Pregnancy (MESH:D011254), Diabetes Mellitus (MESH:D003920), macrosomia (MESH:D005320), placental defects (MESH:D010922), inflammatory response (MESH:D018746), EVT (MESH:D014328), preterm labor (MESH:D007752), IR (MESH:D007333), Maternal (MESH:D000079262), pregnancy-related disorders (MESH:C535932), premature rupture of membranes (MESH:D005322), inflammation (MESH:D007249), preeclampsia (MESH:D011225)
- **Chemicals:** oestradiol (MESH:D004958), PBS (MESH:D007854), EVT (-), L-glutamate (MESH:D018698), acetone (MESH:D000096), Trypan Blue (MESH:D014343), calcium (MESH:D002118), magnesium (MESH:D008274), EDTA (MESH:D004492), glucose (MESH:D005947), L-aspartate (MESH:D001224), fatty acid (MESH:D005227), ice (MESH:D007053), DAPI (MESH:C007293), D-aspartate (MESH:D026603)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** VCT — Homo sapiens (Human), Transformed cell line (CVCL_L783), EVT — Homo sapiens (Human), Transformed cell line (CVCL_5373)

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC8139321/full.md

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC8139321/full.md

## References

58 references — full list in the complete paper: https://tomesphere.com/paper/PMC8139321/full.md

---
Source: https://tomesphere.com/paper/PMC8139321