# C9orf72-derived arginine-containing dipeptide repeats associate with axonal transport machinery and impede microtubule-based motility

**Authors:** Laura Fumagalli, Florence L. Young, Steven Boeynaems, Mathias De Decker, Arpan R. Mehta, Ann Swijsen, Raheem Fazal, Wenting Guo, Matthieu Moisse, Jimmy Beckers, Lieselot Dedeene, Bhuvaneish T. Selvaraj, Tijs Vandoorne, Vanesa Madan, Marka van Blitterswijk, Denitza Raitcheva, Alexander McCampbell, Koen Poesen, Aaron D. Gitler, Philipp Koch, Pieter Vanden Berghe, Dietmar Rudolf Thal, Catherine Verfaillie, Siddharthan Chandran, Ludo Van Den Bosch, Simon L. Bullock, Philip Van Damme

PMC · DOI: 10.1126/sciadv.abg3013 · Science Advances · 2021-04-09

## TL;DR

This study shows that dipeptide repeats from a C9orf72 gene mutation disrupt axonal transport in neurons, contributing to ALS and FTD.

## Contribution

The study reveals that arginine-rich DPRs physically interact with and impair microtubule-based motor complexes in neurons.

## Key findings

- C9orf72 repeat expansions impair microtubule-based transport in patient-derived motor neurons.
- Arginine-rich DPRs inhibit axonal trafficking in both human neurons and Drosophila neurons.
- DPRs bind to motor complexes and microtubules, directly blocking motor protein movement.

## Abstract

Arginine-rich dipeptide repeats associated with ALS and FTD inhibit machinery for microtubule-based axonal cargo transport.

A hexanucleotide repeat expansion in the C9orf72 gene is the most common genetic cause of amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). How this mutation leads to these neurodegenerative diseases remains unclear. Here, we show using patient stem cell–derived motor neurons that the repeat expansion impairs microtubule-based transport, a process critical for neuronal survival. Cargo transport defects are recapitulated by treating neurons from healthy individuals with proline-arginine and glycine-arginine dipeptide repeats (DPRs) produced from the repeat expansion. Both arginine-rich DPRs similarly inhibit axonal trafficking in adult Drosophila neurons in vivo. Physical interaction studies demonstrate that arginine-rich DPRs associate with motor complexes and the unstructured tubulin tails of microtubules. Single-molecule imaging reveals that microtubule-bound arginine-rich DPRs directly impede translocation of purified dynein and kinesin-1 motor complexes. Collectively, our study implicates inhibitory interactions of arginine-rich DPRs with axonal transport machinery in C9orf72-associated ALS/FTD and thereby points to potential therapeutic strategies.

## Linked entities

- **Genes:** C9orf72 (C9orf72-SMCR8 complex subunit) [NCBI Gene 203228]
- **Proteins:** Dhc64C (Dynein heavy chain 64C), Khc (Kinesin heavy chain), gammaTub23C (gamma-Tubulin at 23C)
- **Diseases:** amyotrophic lateral sclerosis (MONDO:0004976), frontotemporal dementia (MONDO:0010857)
- **Species:** Mus musculus (taxon 10090), Drosophila (taxon 7215)

## Full-text entities

- **Genes:** RAN (RAN, member RAS oncogene family) [NCBI Gene 5901] {aka ARA24, Gsp1, TC4}, KIF5A (kinesin family member 5A) [NCBI Gene 3798] {aka ALS25, D12S1889, MY050, NEIMY, NKHC, SPG10}, Kif5c (kinesin family member 5C) [NCBI Gene 16574] {aka KINN, Khc, NKHC, NKHC2}, DCTN1 (dynactin subunit 1) [NCBI Gene 1639] {aka DAP-150, DP-150, HMND14, P135}, FUS (FUS RNA binding protein) [NCBI Gene 2521] {aka ALS6, ETM4, FUS1, HNRNPP2, POMP75, TLS}, Kif5a (kinesin family member 5A) [NCBI Gene 16572] {aka D10Bwg0738e, Khc, Kif5, Kns, mKIAA4086}, Khc (Kinesin heavy chain) [NCBI Gene 36810] {aka 2R6, CG7765, DK, DKH, Dm KHC, DmK}, Dhc36C (Dynein heavy chain at 36C) [NCBI Gene 35061] {aka CG5526, DHC, DHC7A, Dhc, Dhc 36C, Dmel\CG5526}, BICD2 (BICD cargo adaptor 2) [NCBI Gene 23299] {aka SMALED2, SMALED2A, SMALED2B, bA526D8.1}, SCLY (selenocysteine lyase) [NCBI Gene 51540] {aka SCL, hSCL}, TUBA4A (tubulin alpha 4a) [NCBI Gene 7277] {aka ALS22, CMYO26, FTDALS9, H2-ALPHA, OZEMA23, SPAX11}, Kif5b (kinesin family member 5B) [NCBI Gene 16573] {aka Khc, Khcs, Kns1, Ukhc}, PGR (progesterone receptor) [NCBI Gene 5241] {aka NR3C3, PR}, C9orf72 (C9orf72-SMCR8 complex subunit) [NCBI Gene 203228] {aka ALSFTD, DENND9, DENNL72, FTDALS, FTDALS1}, Canx (calnexin) [NCBI Gene 12330] {aka 1110069N15Rik, Cnx, D11Ertd153e}, CAT (catalase) [NCBI Gene 847], KIF5B (kinesin family member 5B) [NCBI Gene 3799] {aka HEL-S-61, KINH, KNS, KNS1, UKHC}, CSF2RA (colony stimulating factor 2 receptor subunit alpha) [NCBI Gene 1438] {aka CD116, CDw116, CSF2R, CSF2RAX, CSF2RAY, CSF2RX}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, MAPT (microtubule associated protein tau) [NCBI Gene 4137] {aka DDPAC, FTD1, FTDP-17, MAPTL, MSTD, MTBT1}, TARDBP (TAR DNA binding protein) [NCBI Gene 23435] {aka ALS10, TDP-43}, SOD1 (superoxide dismutase 1) [NCBI Gene 6647] {aka ALS, ALS1, HEL-S-44, IPOA, SOD, STAHP}, Dhc64C (Dynein heavy chain 64C) [NCBI Gene 38580] {aka CD, CG7507, Cdhc, DHC, DHC1, DYHC}
- **Diseases:** Necrotic (MESH:D009336), behavioral and/or language abnormalities (MESH:D007806), ALS (MESH:D000690), eye disruption (MESH:D015451), neuronal dysfunction (MESH:D009461), cancer (MESH:D009369), muscle weakness (MESH:D018908), FTD (MESH:D057180), Alzheimer's (MESH:D000544), toxicity (MESH:D064420), hereditary spastic paraplegia (MESH:D015419), 3B (MESH:C537391), eye defects (MESH:D005124), Huntington's disease (MESH:D006816), PR (OMIM:239500), wasting (MESH:D019282), neuromuscular disorders (MESH:D009468), C9-ALS/FTD (OMIM:105550), age-related neurodegenerative diseases (MESH:D019636), pigmentation (MESH:D010859)
- **Chemicals:** Pipes (MESH:C008916), water (MESH:D014867), IPTG (MESH:D007544), digoxigenin (MESH:D004076), NaCl (MESH:D012965), 2-mercaptoethanol (MESH:D008623), ATP (MESH:D000255), 6-carboxyfluorescein (MESH:C024098), tetramethylrhodamine (MESH:C005358), urea (MESH:D014508), PBS (MESH:D007854), TBS-T (MESH:C027647), formic acid (MESH:C030544), isoflurane (MESH:D007530), GA (MESH:D005708), 6-FAM (-), Arginine (MESH:D001120), Th (MESH:D013910), GlutaMAX (MESH:C054122), EDTA (MESH:D004492), imidazole (MESH:C029899), NP-40 (MESH:C010615), SDS (MESH:D012967), Duolink (MESH:C431350), betaine (MESH:D001622), PVDF (MESH:C024865), CaCl2 (MESH:D002122), PEG (MESH:D011092), taxol (MESH:D017239), oxygen (MESH:D010100), KCl (MESH:D011189), Triton X-100 (MESH:D017830), PR (MESH:D011221), Alexa Fluor 488 (MESH:C000711379), glucose (MESH:D005947), paraformaldehyde (MESH:C003043), Hoechst 33342 (MESH:C017807), oligonucleotides (MESH:D009841), deoxyuridine triphosphates (MESH:C027078), TFA (MESH:D014269), ice (MESH:D007053), PLA (MESH:C033616), phenol red (MESH:D010637), acetonitrile (MESH:C032159), biotin (MESH:D001710), Hepes (MESH:D006531), MgCl2 (MESH:D015636), SP8 (MESH:C007472), SYBR Green (MESH:C098022), CO2 (MESH:D002245), polyacrylamide (MESH:C016679), DPBS (MESH:C012939), streptomycin (MESH:D013307), Tween (MESH:D011136), phenylmethylsulfonyl fluoride (MESH:D010664), AMP-PNP (MESH:D000266), MgSO4 (MESH:D008278), Silver (MESH:D012834), DTT (MESH:D004229), Cy5 (MESH:C085321)
- **Species:** Spodoptera frugiperda (fall armyworm, species) [taxon 7108], Homo sapiens (human, species) [taxon 9606], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Sus scrofa (pig, species) [taxon 9823], Drosophila melanogaster (fruit fly, species) [taxon 7227], Mus musculus (house mouse, species) [taxon 10090], Sendai virus [taxon 11191], Mycoplasma (genus) [taxon 2093], Escherichia coli (E. coli, species) [taxon 562]
- **Mutations:** C to G, C to F, glycine-arginine, E to H, E to G, proline-arginine, stop at codon 169, D to I, (C) to (E)
- **Cell lines:** S20 — Mus musculus (Mouse), Mouse neuroblastoma, Cancer cell line (CVCL_VU14), ChiPSC- — Homo sapiens (Human), Induced pluripotent stem cell (CVCL_RM97), C9-2B — Homo sapiens (Human), Chronic myelogenous leukemia, BCR-ABL1 positive, Cancer cell line (CVCL_SG40), Sf9 — Spodoptera frugiperda (Fall armyworm), Spontaneously immortalized cell line (CVCL_0549), C9-1B — Homo sapiens (Human), Chronic myelogenous leukemia, BCR-ABL1 positive, Cancer cell line (CVCL_SG39), Khc27 — Homo sapiens (Human), Adult B acute lymphoblastic leukemia, Cancer cell line (CVCL_QX98), S21B — Mus musculus (Mouse), Transformed cell line (CVCL_K245), iPSC Epithelial-1 — Homo sapiens (Human), Induced pluripotent stem cell (CVCL_EE38), C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU),  — Homo sapiens (Human), Frontotemporal dementia and/or amyotrophic lateral sclerosis 1, Induced pluripotent stem cell (CVCL_ZJ43),  — Homo sapiens (Human), Frontotemporal dementia and/or amyotrophic lateral sclerosis 1, Induced pluripotent stem cell (CVCL_ZJ42),  — Homo sapiens (Human), Frontotemporal dementia and/or amyotrophic lateral sclerosis 1, Induced pluripotent stem cell (CVCL_ZJ41),  — Homo sapiens (Human), Frontotemporal dementia and/or amyotrophic lateral sclerosis 1, Induced pluripotent stem cell (CVCL_ZJ40)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC8034861/full.md

## References

67 references — full list in the complete paper: https://tomesphere.com/paper/PMC8034861/full.md

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Source: https://tomesphere.com/paper/PMC8034861