# Genome-Wide Identification and Expression Analyses of Aquaporin Gene Family during Development and Abiotic Stress in Banana

**Authors:** Wei Hu, Xiaowan Hou, Chao Huang, Yan Yan, Weiwei Tie, Zehong Ding, Yunxie Wei, Juhua Liu, Hongxia Miao, Zhiwei Lu, Meiying Li, Biyu Xu, Zhiqiang Jin

PMC · DOI: 10.3390/ijms160819728 · 2015-08-20

## TL;DR

This study identifies and analyzes aquaporin genes in bananas, revealing their roles in fruit development, ripening, and stress response.

## Contribution

The first comprehensive identification and analysis of the aquaporin gene family in bananas, linking them to development and stress responses.

## Key findings

- 47 aquaporin genes were identified in bananas and grouped into four subfamilies.
- Some MaAQP genes are highly expressed during fruit development and ripening.
- Certain MaAQP genes are strongly induced under abiotic stress, suggesting roles in stress resistance.

## Abstract

Aquaporins (AQPs) function to selectively control the flow of water and other small molecules through biological membranes, playing crucial roles in various biological processes. However, little information is available on the AQP gene family in bananas. In this study, we identified 47 banana AQP genes based on the banana genome sequence. Evolutionary analysis of AQPs from banana, Arabidopsis, poplar, and rice indicated that banana AQPs (MaAQPs) were clustered into four subfamilies. Conserved motif analysis showed that all banana AQPs contained the typical AQP-like or major intrinsic protein (MIP) domain. Gene structure analysis suggested the majority of MaAQPs had two to four introns with a highly specific number and length for each subfamily. Expression analysis of MaAQP genes during fruit development and postharvest ripening showed that some MaAQP genes exhibited high expression levels during these stages, indicating the involvement of MaAQP genes in banana fruit development and ripening. Additionally, some MaAQP genes showed strong induction after stress treatment and therefore, may represent potential candidates for improving banana resistance to abiotic stress. Taken together, this study identified some excellent tissue-specific, fruit development- and ripening-dependent, and abiotic stress-responsive candidate MaAQP genes, which could lay a solid foundation for genetic improvement of banana cultivars.

## Full-text entities

- **Diseases:** membrane (MESH:D015433), drought (MESH:C536747), banana (MESH:C000721327)
- **Species:** Solanum tuberosum (potatoes, species) [taxon 4113], Nicotiana tabacum (American tobacco, species) [taxon 4097], Musa balbisiana (Balbis banana, species) [taxon 52838], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Brassica rapa subsp. pekinensis (bai cai, subspecies) [taxon 51351], Physcomitrium patens (species) [taxon 3218], Solanum lycopersicum (tomato, species) [taxon 4081], Musa acuminata (banana, species) [taxon 4641], Populus trichocarpa (black cottonwood, species) [taxon 3694], Brassica oleracea (wild cabbage, species) [taxon 3712], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702]
- **Mutations:** alanine is replaced by threonine, alanine is replaced by a serine
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), BX — Homo sapiens (Human), Melanoma, Cancer cell line (CVCL_U931), DH- — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_2483)

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC4581322/full.md

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Source: https://tomesphere.com/paper/PMC4581322