# Non-contiguous finished genome sequence and description of Clostridiumihumii sp. nov

**Authors:** Vicky Merhej, Anne Pfleiderer, Dhamodharan Ramasamy, Jean-Christophe Lagier, Caroline Michelle, Didier Raoult, Pierre-Edouard Fournier

PMC · DOI: 10.1186/s40793-015-0025-x · 2015-09-19

## TL;DR

This paper introduces a new species of bacteria, Clostridium ihumii, isolated from a human stool sample and provides its complete genome sequence.

## Contribution

The paper presents the first complete genome sequence of the newly identified Clostridium ihumii species.

## Key findings

- C. ihumii is a Gram-positive, anaerobic bacillus isolated from a human stool sample.
- The genome is 4,433,668 bp long and contains 4,076 protein-coding and 85 RNA genes.
- The species was identified from a 21-year-old female with anorexia nervosa.

## Abstract

Clostridium ihumii strain AP5T sp. nov. is a new species within the genus Clostridium. This strain, whose genome is described here, was isolated from the stool sample of a 21-year-old French Caucasian female with anorexia nervosa. C. ihumii is a Gram-positive, anaerobic bacillus. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4,433,668 bp long genome contains 4,076 protein-coding and 85 RNA genes, including 9 rRNA genes.

The online version of this article (doi:10.1186/s40793-015-0025-x) contains supplementary material, which is available to authorized users.

## Linked entities

- **Diseases:** anorexia nervosa (MONDO:0005351)
- **Species:** Clostridium ihumii (taxon 1470356), Clostridium (taxon 1485)

## Full-text entities

- **Genes:** RNAseA [NCBI Gene 101113761], alpha-galactosidase [NCBI Gene 29572385], lysozyme [NCBI Gene 100049062], lipase [NCBI Gene 29572138], alpha-glucosidase [NCBI Gene 29570243], alpha-mannosidase [NCBI Gene 29572032], beta-galactosidase [NCBI Gene 29572111]
- **Diseases:** anorexia nervosa (MESH:D000856), Infection (MESH:D007239), infectious diseases (MESH:D003141), anorexia (MESH:D000855)
- **Species:** Chaetomium sp. CAR (species) [taxon 1585719], Clostridium ihumii (species) [taxon 1470356], Clostridium carboxidivorans P7 (strain) [taxon 536227], Clostridium botulinum (species) [taxon 1491], Clostridium perfringens (species) [taxon 1502], Petrachloros mirabilis (species) [taxon 2918835], Clostridium beijerinckii (species) [taxon 1520], Clostridium carboxidivorans (species) [taxon 217159], Clostridium ihumii AP5 (strain) [taxon 1211817], Clostridium tetani (species) [taxon 1513], Ovis aries (domestic sheep, species) [taxon 9940], Clostridium senegalense JC122 (strain) [taxon 1033737], Clostridioides difficile B-1 (strain) [taxon 1155749], Clostridium senegalense (species) [taxon 1465809], Homo sapiens (human, species) [taxon 9606], Clostridium beijerinckii NCIMB 8052 (strain) [taxon 290402], Clostridioides difficile (species) [taxon 1496], Faecalimicrobium dakarense (species) [taxon 1301100]

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC4575456/full.md

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Source: https://tomesphere.com/paper/PMC4575456