# NSC-640358 acts as RXRα ligand to promote TNFα-mediated apoptosis of cancer cell

**Authors:** Fan Chen, Jiebo Chen, Jiacheng Lin, Anton V. Cheltsov, Lin Xu, Ya Chen, Zhiping Zeng, Liqun Chen, Mingfeng Huang, Mengjie Hu, Xiaohong Ye, Yuqi Zhou, Guanghui Wang, Ying Su, Long Zhang, Fangfang Zhou, Xiao-kun Zhang, Hu Zhou

PMC · DOI: 10.1007/s13238-015-0178-9 · Protein & Cell · 2015-07-09

## TL;DR

A new compound, NSC-640358, acts as an RXRα ligand to promote cancer cell death by targeting RXRα and its truncated form tRXRα.

## Contribution

NSC-640358 is a novel RXRα ligand with a unique binding mode that indirectly regulates TR3 activity and induces cancer cell apoptosis.

## Key findings

- NSC-640358 binds to RXRα and inhibits transactivation of RXRα homodimer and RXRα/TR3 heterodimer.
- N-6 induces TNFα-mediated apoptosis in cancer cells by inhibiting AKT activation and tRXRα/p85α complex formation.
- The compound forms π–π stacking interactions with Trp305 and Phe313 in RXRα, indicating a distinct binding mode.

## Abstract

Retinoid X receptor α (RXRα) and its N-terminally truncated version tRXRα play important roles in tumorigenesis, while some RXRα ligands possess potent anti-cancer activities by targeting and modulating the tumorigenic effects of RXRα and tRXRα. Here we describe NSC-640358 (N-6), a thiazolyl-pyrazole derived compound, acts as a selective RXRα ligand to promote TNFα-mediated apoptosis of cancer cell. N-6 binds to RXRα and inhibits the transactivation of RXRα homodimer and RXRα/TR3 heterodimer. Using mutational analysis and computational study, we determine that Arg316 in RXRα, essential for 9-cis-retinoic acid binding and activating RXRα transactivation, is not required for antagonist effects of N-6, whereas Trp305 and Phe313 are crucial for N-6 binding to RXRα by forming extra π–π stacking interactions with N-6, indicating a distinct RXRα binding mode of N-6. N-6 inhibits TR3-stimulated transactivation of Gal4-DBD-RXRα-LBD by binding to the ligand binding pocket of RXRα-LBD, suggesting a strategy to regulate TR3 activity indirectly by using small molecules to target its interacting partner RXRα. For its physiological activities, we show that N-6 strongly inhibits tumor necrosis factor α (TNFα)-induced AKT activation and stimulates TNFα-mediated apoptosis in cancer cells in an RXRα/tRXRα dependent manner. The inhibition of TNFα-induced tRXRα/p85α complex formation by N-6 implies that N-6 targets tRXRα to inhibit TNFα-induced AKT activation and to induce cancer cell apoptosis. Together, our data illustrate a new RXRα ligand with a unique RXRα binding mode and the abilities to regulate TR3 activity indirectly and to induce TNFα-mediated cancer cell apoptosis by targeting RXRα/tRXRα.

## Linked entities

- **Genes:** RXRA (retinoid X receptor alpha) [NCBI Gene 6256], NR4A1 (nuclear receptor subfamily 4 group A member 1) [NCBI Gene 3164], AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207], Pi3K21B (phosphatidylinositol 3-kinase regulatory subunit alpha) [NCBI Gene 108916999]
- **Chemicals:** NSC-640358 (PubChem CID 5465133), 9-cis-retinoic acid (PubChem CID 449171)

## Full-text entities

- **Genes:** LBP (lipopolysaccharide binding protein) [NCBI Gene 3929] {aka BPIFD2}, Myc (Myc proto-oncogene, bHLH transcription factor) [NCBI Gene 17869] {aka Myc2, Niard, Nird, bHLHe39}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, DNTT (DNA nucleotidylexotransferase) [NCBI Gene 1791] {aka TDT}, RARG (retinoic acid receptor gamma) [NCBI Gene 5916] {aka NR1B3, RARC, RARgamma}, NR4A1 (nuclear receptor subfamily 4 group A member 1) [NCBI Gene 3164] {aka GFRP1, HMR, N10, NAK-1, NGFIB, NP10}, PPARG (peroxisome proliferator activated receptor gamma) [NCBI Gene 5468] {aka CIMT1, FPLD3, GLM1, NR1C3, PPARG1, PPARG2}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, LGALS4 (galectin 4) [NCBI Gene 3960] {aka GAL4, L36LBP}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, TNFRSF25 (TNF receptor superfamily member 25) [NCBI Gene 8718] {aka APO-3, DDR3, DR3, LARD, TNFRSF12, TR3}, PARP1 (poly(ADP-ribose) polymerase 1) [NCBI Gene 142] {aka ADPRT, ADPRT 1, ADPRT1, ARTD1, PARP, PARP-1}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, CDKN2A (cyclin dependent kinase inhibitor 2A) [NCBI Gene 1029] {aka ARF, CAI2, CDK4I, CDKN2, CMM2, INK4}, Cat (catalase) [NCBI Gene 12359] {aka 2210418N07, Cas-1, Cas1, Cs-1}, Rxra (retinoid X receptor alpha) [NCBI Gene 20181] {aka 9530071D11Rik, Nr2b1, RXRalpha1}, CASP8 (caspase 8) [NCBI Gene 841] {aka ALPS2B, CAP4, Casp-8, FLICE, MACH, MCH5}, Rarg (retinoic acid receptor, gamma) [NCBI Gene 19411] {aka Nr1b3, RAR-gamma, RARD, RARgamma2}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, Akt1 (Akt serine/threonine kinase 1) [NCBI Gene 11651] {aka Akt, LTR-akt, PKB, PKB/Akt, PKBalpha, Rac}, RARA (retinoic acid receptor alpha) [NCBI Gene 5914] {aka NR1B1, RAR, RARalpha}, PIK3R1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 5295] {aka AGM7, GRB1, IMD36, p85, p85-ALPHA, p85alpha}, PGA5 (pepsinogen A5) [NCBI Gene 5222] {aka Pg5}, RXRA (retinoid X receptor alpha) [NCBI Gene 6256] {aka NR2B1, RXR-alpha, RXRalpha}
- **Diseases:** lung cancer (MESH:D008175), tumorigenic (MESH:D002471), liver cancer (MESH:D006528), prostatic preneoplastic lesions (MESH:D011469), colon cancer (MESH:D015179), skin abnormalities (MESH:D012868), cancer (MESH:D009369), carcinogenesis (MESH:D063646)
- **Species:** Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** Trp305, (I) for 18, Phe313Ala, Ala substitution of Phe313 or Trp305, Cys with Tyr, Arg316, Phe313, Trp305Ala, R316E, C432Y, Ala substituted with Glu
- **Cell lines:** MCF-7 — Homo sapiens (Human), Invasive breast carcinoma of no special type, Cancer cell line (CVCL_0031), HCT116 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0291), HeLa cervix cancer — Mus musculus (Mouse), Mouse cervical carcinoma, Cancer cell line (CVCL_6C56), HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030), A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), SASI-HS01-00097639 — Homo sapiens (Human), Lung small cell carcinoma, Cancer cell line (CVCL_7033), pBLCAT2 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_A628), MCF-7 breast cancer — Homo sapiens (Human), Transformed cell line (CVCL_WC49), CV-1 — Chlorocebus aethiops (Green monkey), Finite cell line (CVCL_0229), HEK293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), H292 — Homo sapiens (Human), Lung mucoepidermoid carcinoma, Cancer cell line (CVCL_0455)

## Full text

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## Figures

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## References

50 references — full list in the complete paper: https://tomesphere.com/paper/PMC4537469/full.md

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Source: https://tomesphere.com/paper/PMC4537469