# Analytical sequence to study G-CSF effect on the transcriptome of isolated spinal motoneurons from SOD1 G93A mice, an animal model for amyotrophic lateral sclerosis

**Authors:** Alexandre Henriques, Stefan Kastner, Oliver Wafzig, Jose-Luis Gonzalez De Aguilar, Armin Schneider

PMC · DOI: 10.1016/j.gdata.2015.02.003 · Genomics Data · 2015-02-28

## TL;DR

This study examines how G-CSF affects gene activity in spinal motor neurons of mice with a model of amyotrophic lateral sclerosis.

## Contribution

The paper provides quality controls and details the experimental strategy for a microarray study on G-CSF's effects.

## Key findings

- G-CSF re-adjusted gene expression in motoneurons of symptomatic SOD1G93A mice.
- G-CSF modulates genes related to neuromuscular function in the studied animal model.

## Abstract

Granulocyte-colony stimulating factor (G-CSF) has been recently identified as a neurotrophic factor able to preserve motor functions, rescue motor units and extent survival in an animal model of amyotrophic lateral sclerosis, the SOD1 G93A mice. To gain insight into the mode of action of G-CSF, we have recently performed gene expression profiling on isolated lumbar motoneurons from SOD1G93A mice, and shown that G-CSF re-adjusted gene expression in motoneurons of symptomatic SOD1G93A mice and modulates genes related to neuromuscular function (Henriques et al., 2015). Here, we provide quality controls for the microarray experiment (GO accession number GSE60856) and describe the experimental strategy.

## Linked entities

- **Proteins:** CSF3 (colony stimulating factor 3)
- **Diseases:** amyotrophic lateral sclerosis (MONDO:0004976)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Gfap (glial fibrillary acidic protein) [NCBI Gene 14580], Cldn5 (claudin 5) [NCBI Gene 12741] {aka MBEC1, Tmvcf}, Csf3 (colony stimulating factor 3 (granulocyte)) [NCBI Gene 12985] {aka Csfg, G-CSF, MGI-IG}, Sod1 (superoxide dismutase 1, soluble) [NCBI Gene 20655] {aka B430204E11Rik, Cu/Zn-SOD, CuZnSOD, Ipo-1, Ipo1, SODC}, Aif1l (allograft inflammatory factor 1-like) [NCBI Gene 108897] {aka 2810003C17Rik, Iba2}, Nefh (neurofilament, heavy polypeptide) [NCBI Gene 380684] {aka NF-H, NF200, Nfh, mKIAA0845}, Sox10 (SRY (sex determining region Y)-box 10) [NCBI Gene 20665] {aka Dom, Sox21, gt}
- **Diseases:** ALS (MESH:D000690), neurodegenerative disease (MESH:D019636)
- **Chemicals:** sorbitol (MESH:D013012), Tween-80 (MESH:D011136), sodium acetate (MESH:D019346)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** G93A

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC4535899/full.md

## References

5 references — full list in the complete paper: https://tomesphere.com/paper/PMC4535899/full.md

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Source: https://tomesphere.com/paper/PMC4535899