# Vitroprocines, new antibiotics against Acinetobacter baumannii, discovered from marine Vibrio sp. QWI-06 using mass-spectrometry-based metabolomics approach

**Authors:** Chih-Chuang Liaw, Pei-Chin Chen, Chao-Jen Shih, Sung-Pin Tseng, Ying-Mi Lai, Chi-Hsin Hsu, Pieter C. Dorrestein, Yu-Liang Yang

PMC · DOI: 10.1038/srep12856 · Scientific Reports · 2015-08-04

## TL;DR

Researchers discovered new antibiotics called vitroprocines from a marine bacterium, which could help combat Acinetobacter baumannii infections.

## Contribution

The study introduces vitroprocines A-J, new amino-polyketide antibiotics from Vibrio sp. QWI-06, using an integrated metabolomics approach.

## Key findings

- Vitroprocines A-J were identified as amino-polyketide derivatives with antibacterial activity against Acinetobacter baumannii.
- A pyridoxal 5′-phosphate-dependent mechanism is involved in the biosynthesis of vitroprocines, revealed through 13C-labeled precursor experiments.
- This is the first time amino-polyketide derivatives have been elucidated from a marine bacterial species.

## Abstract

A robust and convenient research strategy integrating state-of-the-art analytical techniques is needed to efficiently discover novel compounds from marine microbial resources. In this study, we identified a series of amino-polyketide derivatives, vitroprocines A-J, from the marine bacterium Vibrio sp. QWI-06 by an integrated approach using imaging mass spectroscopy and molecular networking, as well as conventional bioactivity-guided fractionation and isolation. The structure-activity relationship of vitroprocines against Acinetobacter baumannii is proposed. In addition, feeding experiments with 13C-labeled precursors indicated that a pyridoxal 5′-phosphate-dependent mechanism is involved in the biosynthesis of vitroprocines. Elucidation of amino-polyketide derivatives from a species of marine bacteria for the first time demonstrates the potential of this integrated metabolomics approach to uncover marine bacterial biodiversity.

## Linked entities

- **Chemicals:** pyridoxal 5′-phosphate (PubChem CID 1051)
- **Species:** Vibrio sp. QWI-06 (taxon 1638654)

## Full-text entities

- **Genes:** IGF1 (insulin like growth factor 1) [NCBI Gene 3479] {aka IGF, IGF-I, IGFI, MGF}
- **Diseases:** cancer (MESH:D009369), nosocomial infections (MESH:D003428), IHD (MESH:C566784), chronic pain (MESH:D059350), soft tissue sarcoma (MESH:D012509), cytotoxicity (MESH:D064420), hydrogen deficiency (MESH:D007153)
- **Chemicals:** n-hexane (MESH:C026385), phenol (MESH:D019800), 2H (MESH:D003903), S. (MESH:D013455), alanine (MESH:D000409), sphinganine (MESH:C005682), ET-743 (MESH:D000077606), H-7 (MESH:D019307), fatty acid (MESH:D005227), H-6 (MESH:C003027), 2,5-dihydroxybenzoic acid (MESH:C010925), L-tyrosine (MESH:D014443), silica (MESH:D012822), ceftazidime (MESH:D002442), Sulfonolipids (MESH:C015518), Sephadex LH-20 (MESH:C025614), -H3 (MESH:C012616), polyketide (MESH:D061065), dimethyl disulfide (MESH:C021181), ticarcillin (MESH:D013982), olefins (MESH:D000475), C (MESH:D002244), C-6 (MESH:C117224), amine (MESH:D000588), agar (MESH:D000362), serine (MESH:D012694), H (MESH:D006859), 3H (MESH:D014316), H2O (MESH:D014867), (13)C (MESH:C000615229), cysteate (MESH:D003544), cytosine arabinoside (MESH:D003561), 5H (-), Sphingolipids (MESH:D013107), formic acid (MESH:C030544), alpha-cyano-4-hydroxycinnamic acid (MESH:C007175), Ar (MESH:D001128), CHCl3 (MESH:D002725), PLP (MESH:D011732), CH2Cl2 (MESH:D008752), L-phenylalanine (MESH:D010649), tyroscherin (MESH:C495800), ACN (MESH:C084683), acetate (MESH:D000085),  (MESH:D000605),  (MESH:D000900)
- **Species:** Vibrio sp. (species) [taxon 678], Vibrio proteolyticus (species) [taxon 671], Porphyromonas (genus) [taxon 836], Homo sapiens (human, species) [taxon 9606], Sphingomonas (genus) [taxon 13687], Acetobacter subgen. Acetobacter (subgenus) [taxon 151157], Bacillus cereus (species) [taxon 1396], Fusobacterium (genus) [taxon 848], Klebsiella pneumoniae (species) [taxon 573], Pedobacter (genus) [taxon 84567], Prevotella (genus) [taxon 838], Sphingobacterium (genus) [taxon 28453], Bdellovibrio (genus) [taxon 958], Escherichia coli (E. coli, species) [taxon 562], Pseudallescheria sp. (species) [taxon 1871353], Candida albicans (species) [taxon 5476], Staphylococcus aureus (species) [taxon 1280], Vibrio harveyi (species) [taxon 669], Vibrio sp. QWI-06 (species) [taxon 1638654], Salmonella enterica subsp. enterica serovar Typhimurium (no rank) [taxon 90371], Vibrio (genus) [taxon 662], Vibrio proteolyticus NBRC 13287 (strain) [taxon 1219065], Cystobacter (genus) [taxon 42], Flectobacillus (genus) [taxon 101], Mycoplasma (genus) [taxon 2093], Pseudomonas aeruginosa (species) [taxon 287], Acinetobacter baumannii (species) [taxon 470], Bacteroides (genus) [taxon 816]
- **Cell lines:** S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232)

## Full text

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## Figures

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## References

40 references — full list in the complete paper: https://tomesphere.com/paper/PMC4523872/full.md

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Source: https://tomesphere.com/paper/PMC4523872