# Shifts in Abundance and Diversity of Soil Ammonia-Oxidizing Bacteria and Archaea Associated with Land Restoration in a Semi-Arid Ecosystem

**Authors:** Zhu Chen, Wenliang Wu, Xiaoming Shao, Li Li, Yanbin Guo, Guochun Ding

PMC · DOI: 10.1371/journal.pone.0132879 · PLoS ONE · 2015-07-14

## TL;DR

Land restoration in a semi-arid region changed soil ammonia-oxidizing bacteria and slightly affected archaea, reducing nitrification activity.

## Contribution

This study reveals how land restoration impacts ammonia-oxidizing microorganisms and nitrification in semi-arid ecosystems.

## Key findings

- Abundance and community composition of AOB differed significantly between restored lands and farmland.
- Nitrification activity was significantly lower in restored lands compared to farmland.
- AOA showed only minor changes due to land restoration.

## Abstract

The Grain to Green Project (GGP) is an unprecedented land restoration action in China. The project converted large areas (ca 10 million ha) of steep-sloped/degraded farmland and barren land into forest and grassland resulting in ecological benefits such as a reduction in severe soil erosion. It may also affect soil microorganisms involved in ammonia oxidization, which is a key step in the global nitrogen cycle. The methods for restoration that are typically adopted in semi-arid regions include abandoning farmland and growing drought tolerant grass (Lolium perenne L.) or shrubs (Caragana korshinskii Kom.). In the present study, the effects of these methods on the abundance and diversity of ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA) were evaluated via quantitative real-time PCR, terminal restriction fragment length polymorphism and clone library analysis of amoA genes. Comparisons were made between soil samples from three restored lands and the adjacent farmland in Inner Mongolia. Both the abundance and community composition of AOB were significantly different between the restored lands and the adjacent control. Significantly lower nitrification activity was observed for the restored land. Clone library analysis revealed that all AOB amoA gene sequences were affiliated with Nitrosospira. Abundance of the populations that were associated with Nitrosospira sp. Nv6 which had possibly adapted to high concentrations of inorganic nitrogen, decreased on the restored land. Only a slight difference in the AOB communities was observed between the restored land with and without the shrub (Caragana korshinskii Kom.). A minor effect of land restoration on AOA was observed. In summary, land restoration negatively affected the abundance of AOB and soil nitrification activities, suggesting the potential role of GGP in the leaching of nitrates, and in the emission of N2O in related terrestrial ecosystems.

## Linked entities

- **Genes:** amoA (amonabactin biosynthesis protein AmoA) [NCBI Gene 4488097]
- **Chemicals:** nitrates (PubChem CID 943), N2O (PubChem CID 948)
- **Species:** Nitrosospira (taxon 35798)

## Full-text entities

- **Diseases:** AOA (MESH:D020165), AOB (MESH:C000719206)
- **Species:** Nitrososphaera viennensis (species) [taxon 1034015], Caragana korshinskii (species) [taxon 220689], Artemisia frigida (species) [taxon 395280], Aster altaicus (species) [taxon 983245], Escherichia coli (E. coli, species) [taxon 562], Helianthus annuus (common sunflower, species) [taxon 4232], Nitrosospira sp. (species) [taxon 38080], Agropyron cristatum (crested wheatgrass, species) [taxon 4593], Nitrosomonadales (order) [taxon 32003], Solanum tuberosum (potatoes, species) [taxon 4113], Lolium perenne (perennial ryegrass, species) [taxon 4522]

## Full text

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## Figures

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## References

49 references — full list in the complete paper: https://tomesphere.com/paper/PMC4501784/full.md

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Source: https://tomesphere.com/paper/PMC4501784