# The APPEESFRS Peptide, Restricted by the HLA-B*35:01 Molecule, and the APPEESFRF Variant Derived from an Autologous HIV-1 Strain Induces Polyfunctional Responses in CD8+ T Cells

**Authors:** Liliana Acevedo-Sáenz, Liseth Carmona-Pérez, Paula Andrea Velilla-Hernández, Julio C. Delgado, María Teresa Rugeles L.

PMC · DOI: 10.1089/biores.2014.0054 · BioResearch Open Access · 2015-01-01

## TL;DR

This study compares how two HIV peptides affect CD8+ T-cell responses, finding that one variant may enhance immune function and control HIV replication.

## Contribution

The study evaluates autologous HIV peptides' impact on CD8+ T-cell functionality, revealing insights into immune responses against circulating HIV strains.

## Key findings

- AF9 peptide elicited stronger CD8+ T-cell responses compared to AS9, though not statistically significant.
- AF9 induced a polyfunctional profile with cytokines like TNFα, IL-2, and MIP1β.
- Higher TNFα production in response to AF9 correlated negatively with HIV viral load.

## Abstract

Numerous reports have focused on consensus peptides to determine CD8+ T-cell responses; however, few studies evaluated the functional profile using peptides derived from circulating strains of a specific region. We determined the effector profile and maturation phenotype of CD8+ T-cells targeting the consensus APPEESFRS (AS9) epitope and its variant APPEESFRF (AF9), previously identified. The free energy of binding, maturation phenotype, and polyfunctional profile of both peptides were similar. The magnitude of CD8+ T-cell responses to AF9 was greater than the one elicited by AS9, although the difference was not significant. The polyfunctional profile of AF9 was characterized by CD107a/interleukin-2 (IL-2)/macrophage inflammatory protein beta (MIP1β) and by interferon gamma (IFNγ)/MIP1β/tumor necrosis factor alpha (TNFα) in response to AS9. TNFα production was significantly higher in response to AF9 than to AS9, and there was a negative correlation between the absolute number of CD8+ T-cell-producing TNFα and the plasma human immunodeficiency virus (HIV) load, suggesting a role of this cytokine in the control of HIV replication.

## Linked entities

- **Proteins:** CD8A (CD8 subunit alpha), IL2 (interleukin 2), CCL4 (C-C motif chemokine ligand 4), IFNG (interferon gamma), TNF (tumor necrosis factor)

## Full-text entities

- **Genes:** Nef [NCBI Gene 156110], LAMP1 (lysosome associated membrane protein 1) [NCBI Gene 3916] {aka CD107a, LAMPA, LGP120}, CCR7 (C-C motif chemokine receptor 7) [NCBI Gene 1236] {aka BLR2, CC-CKR-7, CCR-7, CD197, CDw197, CMKBR7}, vpr (Vpr) [NCBI Gene 155807], MLLT3 (MLLT3 super elongation complex subunit) [NCBI Gene 4300] {aka AF9, YEATS3}, HLA-C (major histocompatibility complex, class I, C) [NCBI Gene 3107] {aka D6S204, HLA-JY3, HLAC, HLC-C, MHC, PSORS1}, IL7R (interleukin 7 receptor) [NCBI Gene 3575] {aka CD127, CDW127, IL-7R-alpha, IL-7Ralpha, IL7RA, IL7Ralpha}, CCL5 (C-C motif chemokine ligand 5) [NCBI Gene 6352] {aka D17S136E, RANTES, SCYA5, SIS-delta, SISd, TCP228}, FOXP3 (forkhead box P3) [NCBI Gene 50943] {aka AIID, DIETER, IPEX, JM2, PIDX, XPID}, ITGA4 (integrin subunit alpha 4) [NCBI Gene 3676] {aka CD49D, IA4}, HLA-A (major histocompatibility complex, class I, A) [NCBI Gene 3105] {aka HLAA}, CCL3 (C-C motif chemokine ligand 3) [NCBI Gene 6348] {aka G0S19-1, LD78, LD78ALPHA, MIP-1-alpha, MIP1A, SCI}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, RPA1 (replication protein A1) [NCBI Gene 6117] {aka HSSB, MST075, PFBMFT6, REPA1, RF-A, RP-A}, CCL4 (C-C motif chemokine ligand 4) [NCBI Gene 6351] {aka ACT2, AT744.1, G-26, HC21, LAG-1, LAG1}, CD4 (CD4 molecule) [NCBI Gene 920] {aka CD4mut, IMD79, Leu-3, OKT4D, T4}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, CD8A (CD8 subunit alpha) [NCBI Gene 925] {aka CD8, CD8alpha, IMD116, Leu2, p32}, CD28 (CD28 molecule) [NCBI Gene 940] {aka IMD123, Tp44}, IL2 (interleukin 2) [NCBI Gene 3558] {aka IL-2, TCGF, lymphokine}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, TLR2 (toll like receptor 2) [NCBI Gene 7097] {aka CD282, TIL4}
- **Diseases:** chronically infected (MESH:D000088562), acquired immune deficiency syndrome (MESH:D000163), infected (MESH:D007239), HIV disease (MESH:D015658)
- **Species:** Homo sapiens (human, species) [taxon 9606], Human immunodeficiency virus 1 (no rank) [taxon 11676], Human immunodeficiency virus (species) [taxon 12721]
- **Mutations:** tyrosine (Y) at position 9, phenylalanine (F) at position 9, alanine (A) at position 2, S at residue 116, serine (S) to phenylalanine (F), Y at residue 74, S465F

## Full text

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## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC4497628/full.md

## References

32 references — full list in the complete paper: https://tomesphere.com/paper/PMC4497628/full.md

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Source: https://tomesphere.com/paper/PMC4497628