# Ribosome Homeostasis Regulated by SETD2 Preserves Intestinal Epithelial Barrier

**Authors:** Hanyu Rao, Aiting Wang, Yue Xu, Wenxin Feng, Chunxiao Ma, Ziyi Wang, Wei Zhang, Wenqiong Su, Xiuying Xiao, Wei‐Qiang Gao, Xianting Ding, Li Li

PMC · DOI: 10.1002/advs.202508168 · Advanced Science · 2026-01-04

## TL;DR

The study shows that the protein SETD2 helps maintain the intestinal barrier by regulating ribosome production and translation.

## Contribution

Discovers a new role for SETD2 in ribosome homeostasis and translational regulation of intestinal epithelial barrier function.

## Key findings

- SETD2 deficiency reduces ribosome biogenesis and causes transcriptome-proteome discordance.
- SETD2 ablation impairs translational efficiency of cell adhesion and junction genes.
- Disruption of ribosome homeostasis compromises intestinal epithelial barrier integrity.

## Abstract

Strict regulation of epithelial cells is crucial for maintaining intestinal barrier integrity and preventing intestinal diseases. While transcriptional regulation is well recognized as vital in this process, translational regulation is equally important. SETD2, a methyltransferase, is involved in transcriptional regulation to maintain intestinal epithelial barrier function. However, its role in translation remains largely unexplored. Here, we found SETD2 deficiency leads to the downregulation of ribosome biogenesis progress coupled with transcriptome‐proteome discordance. Further ribosome profiling sequencing analyses showed reduced translational efficiency of cell adhesion and junction signatures in impaired intestinal epithelial barrier. Mechanistically, SETD2 ablation causes dysregulation and recruitment disorders of ribosome biogenesis factors, impairing the composition and distribution of ribosomal proteins. This disruption of ribosome biogenesis and homeostasis results in translational disorder of barrier maintenance genes, thereby compromising the intestinal barrier. Collectively, our findings unveil a previously unappreciated role of ribosome biogenesis and translational regulation in safeguarding intestinal epithelial barrier, and disclose a previously undiscovered role of SETD2 in modulating ribosome homeostasis.

SETD2 ablation causes dysregulation and recruitment defects of ribosome biogenesis factors, resulting in translational disorders of barrier maintenance genes, thereby compromising the intestinal barrier. These findings unveil a previously unappreciated role of ribosome biogenesis and translational regulation in preserving the intestinal epithelial barrier, and disclose a previously undiscovered role of SETD2 in modulating ribosome homeostasis.

## Linked entities

- **Genes:** SETD2 (SET domain containing 2, histone lysine methyltransferase) [NCBI Gene 29072]

## Full-text entities

- **Genes:** SETD2 (SET domain containing 2, histone lysine methyltransferase) [NCBI Gene 29072] {aka HBP231, HIF-1, HIP-1, HSPC069, HYPB, KMT3A}
- **Diseases:** translational (OMIM:614922), intestinal diseases (MESH:D007410)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13042805/full.md

## References

69 references — full list in the complete paper: https://tomesphere.com/paper/PMC13042805/full.md

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Source: https://tomesphere.com/paper/PMC13042805