# ATP6V1B2 alleviates hepatic steatosis by promoting lysosomal acidification in hepatocytes

**Authors:** Ruizi Xu, Fuji Yang, Zhuan Zhang, Fang Cheng, Shihui Li, Yongmin Yan, Yanan Wang, Jing Zhou

PMC · DOI: 10.1038/s41420-026-03052-8 · Cell Death Discovery · 2026-03-24

## TL;DR

This study shows that ATP6V1B2 helps reduce liver fat by maintaining lysosomal acidity, offering a new target for treating liver disease.

## Contribution

The novel finding is that ATP6V1B2 regulates lipid metabolism via lysosomal acidification and FASN degradation.

## Key findings

- Reduced ATP6V1B2 expression in MASLD patients correlates with increased liver lipid accumulation.
- ATP6V1B2 maintains lysosomal acidity, which is essential for degrading fatty acid synthase (FASN).

## Abstract

Metabolic dysfunction-associated steatotic liver disease (MASLD) is a common metabolic disorder characterized by the abnormal accumulation of fat in the liver. ATP6V1B2, an essential subunit of the vacuolar ATPase (V-ATPase) complex, plays a pivotal role in its function and assembly. Despite its importance, the regulatory role of ATP6V1B2 and its molecular mechanism in MASLD progression remain poorly understood. In this study, we observed a significant reduction in ATP6V1B2 expression in the serum of MASLD patients. Experimental results demonstrated that inhibiting ATP6V1B2 expression in liver cells led to increased lipid accumulation, aggravated oxidative stress, upregulation of fatty acid synthase (FASN), and impaired autophagic activity. Further investigation revealed that ATP6V1B2 promotes the lysosomal degradation of FASN by maintaining the acidic environment of lysosomes, thereby playing a crucial role in lipid metabolism regulation. These findings uncover the critical mechanism by which ATP6V1B2 contributes to MASLD development and suggest that restoring its function could offer novel therapeutic strategies for treating this condition.

## Linked entities

- **Genes:** ATP6V1B2 (ATPase H+ transporting V1 subunit B2) [NCBI Gene 526], FASN (fatty acid synthase) [NCBI Gene 2194]
- **Proteins:** VhaSFD (Vacuolar H[+]-ATPase SFD subunit), FASN (fatty acid synthase)
- **Diseases:** MASLD (MONDO:0013209), metabolic dysfunction-associated steatotic liver disease (MONDO:0013209)

## Full-text entities

- **Genes:** MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, SOD1 (superoxide dismutase 1) [NCBI Gene 6647] {aka ALS, ALS1, HEL-S-44, IPOA, SOD, STAHP}, CXCL8 (C-X-C motif chemokine ligand 8) [NCBI Gene 3576] {aka GCP-1, GCP1, IL8, LECT, LUCT, LYNAP}, Atp6v0d2 (ATPase, H+ transporting, lysosomal V0 subunit D2) [NCBI Gene 242341] {aka 1620401A02Rik, V-ATPase}, LAMP1 (lysosome associated membrane protein 1) [NCBI Gene 3916] {aka CD107a, LAMPA, LGP120}, NUP62 (nucleoporin 62) [NCBI Gene 23636] {aka IBSN, SNDI, p62}, XBP1 (X-box binding protein 1) [NCBI Gene 7494] {aka TREB-5, TREB5, XBP-1, XBP2}, Tfeb (transcription factor EB) [NCBI Gene 21425] {aka Tcfeb, bHLHe35}, Mtor (mechanistic target of rapamycin kinase) [NCBI Gene 56717] {aka 2610315D21Rik, FRAP, FRAP2, Frap1, RAFT1, RAPT1}, FASN (fatty acid synthase) [NCBI Gene 2194] {aka FAS, OA-519, SDR27X1}, ATP6V0A2 (ATPase H+ transporting V0 subunit a2) [NCBI Gene 23545] {aka A2, ARCL, ARCL2A, ATP6A2, ATP6N1D, J6B7}, GPT (glutamic--pyruvic transaminase) [NCBI Gene 2875] {aka AAT1, ALT, ALT1, GPT1, SGPT}, ERN1 (endoplasmic reticulum to nucleus signaling 1) [NCBI Gene 2081] {aka IRE1, IRE1P, IRE1a, hIRE1p}, ATP6V1B2 (ATPase H+ transporting V1 subunit B2) [NCBI Gene 526] {aka ATP6B1B2, ATP6B2, DOOD, HO57, VATB, VPP3}, SLC17A5 (solute carrier family 17 member 5) [NCBI Gene 26503] {aka AST, ISSD, NSD, SD, SIALIN, SIASD}, HSPA5 (heat shock protein family A (Hsp70) member 5) [NCBI Gene 3309] {aka BIP, GRP78, HEL-S-89n}, DDIT3 (DNA damage inducible transcript 3) [NCBI Gene 1649] {aka AltDDIT3, C/EBPzeta, CEBPZ, CHOP, CHOP-10, CHOP10}, MAP1LC3B (microtubule associated protein 1 light chain 3 beta) [NCBI Gene 81631] {aka ATG8F, LC3B, MAP1A/1BLC3, MAP1LC3B-a}, Atp6v1b2 (ATPase, H+ transporting, lysosomal V1 subunit B2) [NCBI Gene 11966] {aka Atp6b2, HO57}, Actb (actin, beta) [NCBI Gene 11461] {aka Actx, E430023M04Rik, beta-actin}, EIF2AK3 (eukaryotic translation initiation factor 2 alpha kinase 3) [NCBI Gene 9451] {aka PEK, PERK, WRS}, TFEB (transcription factor EB) [NCBI Gene 7942] {aka ALPHATFEB, BHLHE35, TCFEB}, MAP1LC3A (microtubule associated protein 1 light chain 3 alpha) [NCBI Gene 84557] {aka ATG8E, LC3, LC3A, MAP1ALC3, MAP1BLC3}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}
- **Diseases:** metabolic diseases (MESH:D008659), Hepatic lipotoxicity (MESH:D056486), fat (MESH:D004620), cirrhosis (MESH:D005355), MASLD (MESH:D008107), hepatic lipid (MESH:D011017), MASH (MESH:D005234), inflammation (MESH:D007249), Defects (MESH:D000013), liver cirrhosis (MESH:D008103), pulmonary fibrosis (MESH:D011658), neuronal degeneration (MESH:D009410), MCD (MESH:D002796), NAFLD (MESH:D065626), FL (MESH:D008224), Dysfunction of (MESH:D006331), lipid metabolism disorders (MESH:D052439), hepatocellular carcinoma (MESH:D006528), lysosomal (MESH:D016464)
- **Chemicals:** DCFH-DA (MESH:C029569), ROS (MESH:D017382), Oil Red O (MESH:C011049), Paraffin (MESH:D010232), JC-1 (MESH:C068624), GSH (MESH:D005978), PA (MESH:D019308), PBS (MESH:D007854), H&amp;E (MESH:D006371), H2O2 (MESH:D006861), penicillin (MESH:D010406), oil (MESH:D009821), LysoTracker (MESH:C493330), hematoxylin (MESH:D006416), ATP (MESH:D000255), CQ (MESH:D002738), choline (MESH:D002794), OA (MESH:D019301), glutaraldehyde (MESH:D005976), Hoechst 33342 (MESH:C017807), puromycin (MESH:D011691), glucose (MESH:D005947), sugars (MESH:D000073893), water (MESH:D014867), free fatty acids (MESH:D005230), isopropanol (MESH:D019840), cholesterol (MESH:D002784), -D2449 (-), citrate (MESH:D019343), streptomycin (MESH:D013307), hydrogen (MESH:D006859), PVDF (MESH:C024865), Lipofectamine 2000 (MESH:C086724), MDA (MESH:D008315), Triton X-100 (MESH:D017830), methionine (MESH:D008715), RAPA (MESH:D020123), fatty acid (MESH:D005227), acetone (MESH:D000096), MG132 (MESH:C072553), BODIPY (MESH:C095489), paraformaldehyde (MESH:C003043), Nile Red (MESH:C044808), SDS (MESH:D012967), Lipid (MESH:D008055), fat (MESH:D005223), Trizol (MESH:C411644), biotin (MESH:D001710), TG (MESH:D014280)
- **Species:** Mycoplasma (genus) [taxon 2093], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** C2053S, C2003S, S0131S, S0033S
- **Cell lines:** HepG2-shATP6V1B2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_3701), C57BL/6 — Mus musculus (Mouse), Transformed cell line (CVCL_C0MU), shATP6V1B2 — Homo sapiens (Human), Uveal melanoma, Cancer cell line (CVCL_VP04), HepG2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027), MPH — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_A5PX)

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Source: https://tomesphere.com/paper/PMC13040012