# Malic enzyme 1 contributes to tumorigenesis and lenvatinib resistance in hepatocellular carcinoma via FSP1-dependent ferroptosis evasion

**Authors:** Danyi Wu, Huanhuan Xu, Yi Guo, Lulu Lu, Dan Han, Luyi Chen, Ruoxuan Lei, Min Li, Wei Wu, Wen-Zhuo He, Yingying Yu, Xuexian Fang

PMC · DOI: 10.1038/s41419-026-08572-w · Cell Death & Disease · 2026-03-25

## TL;DR

Malic enzyme 1 (ME1) promotes liver cancer growth and drug resistance by helping cancer cells avoid a type of cell death called ferroptosis.

## Contribution

The study identifies ME1 as a novel driver of HCC progression and lenvatinib resistance through the NADPH-FSP1-CoQH2 pathway.

## Key findings

- ME1 is upregulated in HCC and correlates with poor prognosis.
- ME1 promotes HCC cell viability and tumor growth in mice.
- ME1 overexpression causes lenvatinib resistance, which is reversed by ME1 knockout.

## Abstract

Hepatocellular carcinoma (HCC) is the most prevalent hepatic malignancy worldwide, accounting for approximately 90% of all primary liver cancer cases. However, the mechanisms involving in liver tumorigenesis and drug resistance remain unclear, largely restricting the clinical management of HCC. Here, we first evaluated the clinical significance of malic enzyme 1 (ME1) in HCC patients and revealed that ME1 was significantly upregulated in tumor tissues and positively correlated with poor prognosis. Gain- and loss-of-function experiments suggested that ME1 promoted HCC cell viability in vitro. Consistently, hepatocyte-specific Me1 knockout (Me1HKO) mice treated with diethylnitrosamine (DEN) showed reduced tumor burden as compared to Me1Flox mice. In addition, ME1 overexpression conferred resistance to the first-line therapeutic drug lenvatinib, while knockout of ME1 restored drug sensitivity in lenvatinib-resistant HCC cells. Mechanistically, we showed that ME1 could regulate ferroptosis of HCC cells through its function on NADPH production. We further identified ferroptosis suppressor protein 1 (FSP1) as a key downstream effector, which utilized ubiquinol (CoQH2) as a lipophilic radical-trapping antioxidant to block the accumulation of lipid peroxides to pro-ferroptotic levels. In summary, our findings demonstrated that ME1 promotes HCC progression by activating the NADPH-FSP1-CoQH2 axis and thereby inhibiting ferroptosis, suggesting a promising therapeutic strategy for HCC treatment.

## Linked entities

- **Genes:** ME1 (malic enzyme 1) [NCBI Gene 4199], S100A4 (S100 calcium binding protein A4) [NCBI Gene 6275]
- **Proteins:** S100A4 (S100 calcium binding protein A4)
- **Chemicals:** lenvatinib (PubChem CID 9823820), diethylnitrosamine (PubChem CID 5921), NADPH (PubChem CID 5884), ubiquinol (PubChem CID 9962735), CoQH2 (PubChem CID 9962735)
- **Diseases:** hepatocellular carcinoma (MONDO:0007256), HCC (MONDO:0007256)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Atl1 (atlastin GTPase 1) [NCBI Gene 73991] {aka 4930435M24Rik, Adfsp, Fsp1, Spg3, Spg3a}, Me1 (malic enzyme 1, NADP(+)-dependent, cytosolic) [NCBI Gene 17436] {aka D9Ertd267e, Mdh-1, Mod-1, Mod1}, ACYP1 (acylphosphatase 1) [NCBI Gene 97] {aka ACYPE}, Afp (alpha fetoprotein) [NCBI Gene 11576], PTGS2 (prostaglandin-endoperoxide synthase 2) [NCBI Gene 5743] {aka COX-2, COX2, GRIPGHS, PGG/HS, PGHS-2, PHS-2}, AIFM2 (AIF family member 2, ferroptosis suppressor) [NCBI Gene 84883] {aka AMID, FSP1, PRG3}, Adgre1 (adhesion G protein-coupled receptor E1) [NCBI Gene 13733] {aka DD7A5-7, EGF-TM7, Emr1, F4/80, Gpf480, Ly71}, TXK (TXK tyrosine kinase) [NCBI Gene 7294] {aka BTKL, PSCTK5, PTK4, RLK, TKL}, SREBF2 (sterol regulatory element binding transcription factor 2) [NCBI Gene 6721] {aka SREBP-2, SREBP2, bHLHd2}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, Mki67 (antigen identified by monoclonal antibody Ki 67) [NCBI Gene 17345] {aka D630048A14Rik, Ki-67, Ki67}, ME1 (malic enzyme 1) [NCBI Gene 4199] {aka HUMNDME, MES}, CHAC1 (ChaC glutathione specific gamma-glutamylcyclotransferase 1) [NCBI Gene 79094], Slc17a5 (solute carrier family 17 (anion/sugar transporter), member 5) [NCBI Gene 235504] {aka 4631416G20Rik, 4732491M05, AST, ISSD, NSD, SD}, Gpx4 (glutathione peroxidase 4) [NCBI Gene 625249] {aka GPx-4, GSHPx-4, PHGPx, mtPHGPx, snGPx}, GPX4 (glutathione peroxidase 4) [NCBI Gene 2879] {aka GPx-4, GSHPx-4, MCSP, PHGPx, SMDS, snGPx}, DHODH (dihydroorotate dehydrogenase (quinone)) [NCBI Gene 1723] {aka DHOdehase, POADS, URA1}, ZHX2 (zinc fingers and homeoboxes 2) [NCBI Gene 22882] {aka AFR1, RAF}, DECR1 (2,4-dienoyl-CoA reductase 1) [NCBI Gene 1666] {aka DECR, NADPH, SDR18C1}, Gpt (glutamic pyruvic transaminase, soluble) [NCBI Gene 76282] {aka 1300007J06Rik, 2310022B03Rik, ALT, ALT1, Gpt-1, Gpt1}, ATL1 (atlastin GTPase 1) [NCBI Gene 51062] {aka AD-FSP, ATL-1, FSP1, HSN1D, SPG3, SPG3A}, Dntt (deoxynucleotidyltransferase, terminal) [NCBI Gene 21673] {aka Tdt}
- **Diseases:** liver injury (MESH:D017093), breast cancer (MESH:D001943), metabolic dysfunction-associated steatohepatitis (MESH:D005234), inflammatory (MESH:D007249), hepatic fibrosis (MESH:D008103), synovial sarcoma (MESH:D013584), embryonic lethality (MESH:D020964), alcohol-associated liver disease (MESH:D008108), cancer (MESH:D009369), tissue injury (MESH:D017695), tumorigenic (MESH:D002471), HCC (MESH:D006528), gastric cancer (MESH:D013274), cytotoxicity (MESH:D064420), infection with hepatitis B (MESH:D006509), carcinogenesis (MESH:D063646), liver tumors (MESH:D008113)
- **Chemicals:** CO2 (MESH:D002245), hematoxylin (MESH:D006416), pyruvate (MESH:D019289), 4-CBA (MESH:C040768), glutaraldehyde (MESH:D005976), Sorafenib (MESH:D000077157), malate (MESH:C030298), ubiquinol (MESH:C003741), E7080 (MESH:C531958), paraffin (MESH:D010232), 4-HNE (MESH:C027576), GSSG (MESH:D019803), lipid peroxides (MESH:D008054), AA (MESH:D016718), GSH (MESH:D005978), Oxylipins (MESH:D054883), PBS (MESH:D007854), Auranofin (MESH:D001310), H&amp;E (MESH:D006371), penicillin (MESH:D010406), ubiquinone (MESH:D014451), DEN (MESH:D004052), paraformaldehyde (MESH:C003043), polyoxymethylene (MESH:C010102), eosin (MESH:D004801), SDS (MESH:D012967), iron (MESH:D007501), NADP+ (MESH:D009249), lipid (MESH:D008055), TRIzol (MESH:C411644), cholesterol (MESH:D002784), FeSO4 (-), streptomycin (MESH:D013307), PVDF (MESH:C024865), MDA (MESH:D008315), crystal violet (MESH:D005840), ethanol (MESH:D000431), acetone (MESH:D000096), dUTP (MESH:C027078)
- **Species:** hepatitis C virus [taxon 11103], Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Cell lines:** Huh1 — Homo sapiens (Human), Adult hepatocellular carcinoma, Cancer cell line (CVCL_2956), Huh6 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_4381), HepG2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027), HLE — Homo sapiens (Human), Adult hepatocellular carcinoma, Cancer cell line (CVCL_1281), BALB/c — Mus musculus (Mouse), Spontaneously immortalized cell line (CVCL_0184), shME1 — Mus musculus (Mouse), Hybridoma (CVCL_C7RB), Huh7 — Homo sapiens (Human), Adult hepatocellular carcinoma, Cancer cell line (CVCL_0336)

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Source: https://tomesphere.com/paper/PMC13039963