# ZDHHC9 palmitoylates LAMTOR1 to promote renal cell carcinoma malignant progression

**Authors:** Bo Liu, Tao Hou, Xizhi Liu, Lu Liu, Zhiqiang Ma, Yujiao Zhang

PMC · DOI: 10.1038/s41419-026-08558-8 · Cell Death & Disease · 2026-03-19

## TL;DR

This study shows how the enzyme ZDHHC9 promotes kidney cancer by modifying a protein called LAMTOR1, which helps activate cancer growth pathways.

## Contribution

The study identifies ZDHHC9 as a novel regulator of mTOR signaling in renal cell carcinoma through palmitoylation of LAMTOR1.

## Key findings

- ZDHHC9 palmitoylates LAMTOR1 at Cys3/4 residues, enhancing mTORC1 recruitment.
- This modification activates mTOR signaling, promoting renal cell carcinoma progression.
- ZDHHC9 emerges as a potential diagnostic and therapeutic target for RCC.

## Abstract

The lysosomal regulator complex member LAMTOR1 serves as a crucial pivot that recruits the mechanistic target of rapamycin complex 1 (mTORC1) to the lysosomal surface, thereby influencing biological processes such as cell growth and cancer progression. In renal cell carcinoma (RCC), existing studies reveal that mTORC1 signaling contributes to cancer progression. However, the precise regulatory mechanisms underlying mTOR signaling in RCC remain unclear and warrant further investigation. Here, we demonstrate that the palmitoylation enzyme Zinc Finger DHHC-Type Containing 9 (ZDHHC9) activates the mTOR signaling pathway, thereby accelerating cancer progression and highlighting its potential role in RCC. In our study, we identified that ZDHHC9 specifically palmitoylates LAMTOR1 at its Cys3/4 residues, enhancing the recruitment of mTORC1 and subsequently activating the mTOR signaling cascade. Collectively, our findings provide novel insights into the pathogenesis of RCC and establish ZDHHC9 as a key mediator of RCC progression through the palmitoylation of LAMTOR1, which may serve as a promising target for the diagnosis and treatment of this malignancy.

## Linked entities

- **Genes:** ZDHHC9 (zDHHC palmitoyltransferase 9) [NCBI Gene 51114], LAMTOR1 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 1) [NCBI Gene 55004], Crtc (CREB-regulated transcription coactivator) [NCBI Gene 39970]
- **Diseases:** renal cell carcinoma (MONDO:0005086)

## Full-text entities

- **Genes:** ANXA5 (annexin A5) [NCBI Gene 308] {aka ANX5, CPB-I, ENX2, HEL-S-7, PP4, RPRGL3}, ZDHHC9 (zDHHC palmitoyltransferase 9) [NCBI Gene 51114] {aka CGI89, CXorf11, DHHC9, MMSA1, MRXSR, MRXSZ}, Lamtor1 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 1) [NCBI Gene 66508] {aka 2400001E08Rik, Pdro, p18}, Vcl (vinculin) [NCBI Gene 22330] {aka 9430097D22}, Egfr (epidermal growth factor receptor) [NCBI Gene 13649] {aka 9030024J15Rik, Erbb, Errb1, Errp, Wa5, wa-2}, LAMTOR1 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 1) [NCBI Gene 55004] {aka C11orf59, PDRO, Ragulator1, p18, p27RF-Rho}, Casp3 (caspase 3) [NCBI Gene 12367] {aka A830040C14Rik, AC-3, CASP-3, CC3, CPP-32, CPP32}, Stat1 (signal transducer and activator of transcription 1) [NCBI Gene 20846] {aka 2010005J02Rik}, BAX (BCL2 associated X, apoptosis regulator) [NCBI Gene 581] {aka BCL2L4}, Cd274 (CD274 antigen) [NCBI Gene 60533] {aka A530045L16Rik, B7h1, Pdcd1l1, Pdcd1lg1, Pdl1}, CASP3 (caspase 3) [NCBI Gene 836] {aka CPP32, CPP32B, SCA-1}, RPS6KA5 (ribosomal protein S6 kinase A5) [NCBI Gene 9252] {aka MSK1, MSPK1, RLPK}, RPS6KB1 (ribosomal protein S6 kinase B1) [NCBI Gene 6198] {aka PS6K, S6K, S6K-beta-1, S6K1, STK14A, p70 S6KA}, Zdhhc9 (zinc finger, DHHC domain containing 9) [NCBI Gene 208884] {aka 6430508G22, 9530098M12Rik}, Ifng (interferon gamma) [NCBI Gene 15978] {aka IFN-g, If2f, Ifg}, Cdk9 (cyclin dependent kinase 9) [NCBI Gene 107951] {aka PITALRE}, PPT1 (palmitoyl-protein thioesterase 1) [NCBI Gene 5538] {aka CLN1, INCL, PPT}, CGAS (cyclic GMP-AMP synthase) [NCBI Gene 115004] {aka C6orf150, D4, MB21D1, h-cGAS}, Myc (Myc proto-oncogene, bHLH transcription factor) [NCBI Gene 17869] {aka Myc2, Niard, Nird, bHLHe39}, Mtor (mechanistic target of rapamycin kinase) [NCBI Gene 56717] {aka 2610315D21Rik, FRAP, FRAP2, Frap1, RAFT1, RAPT1}, COL11A2 (collagen type XI alpha 2 chain) [NCBI Gene 1302] {aka DFNA13, DFNB53, FBCG2, HKE5, OSMEDA, OSMEDB}, Rps6 (ribosomal protein S6) [NCBI Gene 20104] {aka S6R}, Hspa5 (heat shock protein family A (Hsp70) member 5) [NCBI Gene 14828] {aka Bip, D2Wsu141e, D2Wsu17e, Grp78, Hsce70, SEZ-7}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, RPS6 (ribosomal protein S6) [NCBI Gene 6194] {aka S6, eS6}, RHEB (Ras homolog, mTORC1 binding) [NCBI Gene 6009] {aka RHEB2}, Ckap4 (cytoskeleton-associated protein 4) [NCBI Gene 216197] {aka 5630400A09Rik, CLIMP-63, P63}, Ldha (lactate dehydrogenase A) [NCBI Gene 16828] {aka Ldh1, Ldhm, l7R2}, Erg (ETS transcription factor) [NCBI Gene 13876] {aka D030036I24Rik}, Mki67 (antigen identified by monoclonal antibody Ki 67) [NCBI Gene 17345] {aka D630048A14Rik, Ki-67, Ki67}, TMEM192 (transmembrane protein 192) [NCBI Gene 201931], Parp1 (poly (ADP-ribose) polymerase family, member 1) [NCBI Gene 11545] {aka 5830444G22Rik, ARTD1, Adprp, Adprt1, PARP, PPOL}, Bax (BCL2-associated X protein) [NCBI Gene 12028]
- **Diseases:** bladder cancer (MESH:D001749), hepatoma carcinoma (MESH:D006528), renal cancer (MESH:D007680), cytotoxicity (MESH:D064420), pain (MESH:D010146), neuropathic cancer pain (MESH:D000072716), pancreatic cancer (MESH:D010190), colorectal carcinoma (MESH:D015179), leukemia (MESH:D007938), TNBC (MESH:D064726), prostate cancer (MESH:D011471), hepatic metastases (MESH:D009362), RCC (MESH:D002292), breast cancer (MESH:D001943), inflammatory (MESH:D007249), gliomas (MESH:D005910), lung adenocarcinoma (MESH:D000077192), Tumor (MESH:D009369)
- **Chemicals:** DAB (MESH:C000469), Docetaxel (MESH:D000077143), AP (MESH:D000667), paraformaldehyde (MESH:C003043), SDS (MESH:D012967), formazan (MESH:D005562), DAPI (MESH:C007293), Doxorubicin (MESH:D004317), Cisplatin (MESH:D002945), EDTA (MESH:D004492), Biotin (MESH:D001710), Acyl-biotin (-), Agarose (MESH:D012685), AZD-8055 (MESH:C546624), PVDF (MESH:C024865), streptomycin (MESH:D013307), EdU (MESH:C022811), EtOH (MESH:D000431), Triton X-100 (MESH:D017830), acetone (MESH:D000096), Rapamycin (MESH:D020123), CO2 (MESH:D002245), N-ethylmaleimide (MESH:D005033), 2-Bromohexadecanoic acid (MESH:C022776), NaCl (MESH:D012965), Gemcitabine (MESH:D000093542), MTT (MESH:C070243), 7-AAD (MESH:C025942), hydroxylamine (MESH:D019811), morphine (MESH:D009020), Orlistat (MESH:D000077403), cysteine (MESH:D003545), AA (MESH:D000596), penicillin (MESH:D010406), DMSO (MESH:D004121)
- **Species:** Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** cysteine (Cys) to serine (Ser), T55035S, M20008M, T55365S, T55306S, M20007M, T55164S
- **Cell lines:** SW839 — Homo sapiens (Human), Clear cell renal cell carcinoma, Cancer cell line (CVCL_3604), Hela — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030), SMK-101 — Mus musculus (Mouse), Hybridoma (CVCL_J815), C 769-P — Homo sapiens (Human), Renal cell carcinoma, Cancer cell line (CVCL_1050), 786-O — Homo sapiens (Human), Renal cell carcinoma, Cancer cell line (CVCL_1051), 293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), PA2657 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_YD35), Renca — Mus musculus (Mouse), Mouse kidney carcinoma, Cancer cell line (CVCL_2174), HEK — Homo sapiens (Human), Transformed cell line (CVCL_0045), PC3495S — Homo sapiens (Human), Finite cell line (CVCL_1V20)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13039863/full.md

## References

4 references — full list in the complete paper: https://tomesphere.com/paper/PMC13039863/full.md

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Source: https://tomesphere.com/paper/PMC13039863