# The NAD salvage pathway enzyme NMNAT-C sustains dark-phase NAD+ homeostasis in cyanobacteria

**Authors:** Feng Zhang, Hailei Zhang, Pengxi Wang, Yinyao Qi, Huankai Li, Lin Zhu, Gefei Huang, Yiji Xia, Zongwei Cai

PMC · DOI: 10.1093/plphys/kiag143 · 2026-03-16

## TL;DR

A recycling enzyme helps cyanobacteria maintain levels of a vital cellular cofactor during darkness, supporting metabolic stability across daily light–dark cycles.

## Contribution

NMNAT-C is identified as a key enzyme in the NAD+ salvage pathway that sustains NAD+ homeostasis during dark phases in cyanobacteria.

## Key findings

- Deleting NMNAT-C accelerated NAD+ depletion during dark periods and increased dark stress sensitivity.
- Overexpression of NMNAT-C temporarily raised NAD+ levels but caused adverse effects over time.
- NMNAT-C mediates metabolic crosstalk between the NAD+ salvage and de novo pathways.

## Abstract

Nicotinamide adenine dinucleotide (NAD+) is a crucial cofactor in cyanobacteria, which serve as model organisms for studying photosynthesis. Maintaining NAD+ homeostasis in cyanobacteria is critically important, and it is currently believed that multiple pathways contribute to NAD+ biosynthesis in these organisms. However, the specific contribution of each pathway to NAD+ supplementation under both light and dark conditions, which determines NAD+ homeostasis, has not yet been studied. In this study, we identified NMNAT-C, a cyanobacterial nicotinamide nucleotide adenylyltransferase (NMNAT), as a key player in NAD+ homeostasis, particularly during dark phases. NMNAT-C showed opposite-phase oscillations in expression, aligned with NAD+ fluctuations during light–dark cycles. Genetic and biochemical tests revealed that deleting NMNAT-C in one cyanobacterium (Synechococcus elongatus PCC 7942) accelerated NAD+ depletion during dark periods, increased sensitivity to dark stress, and impacted growth rate. Conversely, induced overexpression of NMNAT-C temporarily raised NAD+ levels but also caused adverse effects over time. Metabolomic analysis indicated that NMNAT-C plays a role in mediating the metabolic crosstalk between the NAD+ salvage pathway and the de novo pathway. Our results identify NMNAT-C as a key regulator of NAD+ dynamics that aligns with daily cycles and suggest that this enzyme plays a crucial role in maintaining NAD+ homeostasis through the NAD+ salvage pathway.

A recycling enzyme helps cyanobacteria maintain levels of a vital cellular cofactor during darkness, supporting metabolic stability across daily light–dark cycles.

## Linked entities

- **Chemicals:** NAD+ (PubChem CID 5892), nicotinamide adenine dinucleotide (PubChem CID 925)

## Full-text entities

- **Genes:** NMNAT1 (nicotinamide nucleotide adenylyltransferase 1) [NCBI Gene 64802] {aka LCA9, NMNAT, PNAT1, SHILCA}, NAPRT (nicotinate phosphoribosyltransferase) [NCBI Gene 93100] {aka NAPRT1, PP3856}, NADSYN1 (NAD synthetase 1) [NCBI Gene 55191] {aka VCRL3}
- **Diseases:** NMPRT (MESH:D007926)
- **Chemicals:** glycerol (MESH:D005990), TCA (MESH:D014238), EDTA (MESH:D004492), NMN (MESH:D009537), agar (MESH:D000362), HEPES (MESH:D006531), tryptophan (MESH:D014364), starch (MESH:D013213), NADP(H) (MESH:D009249), 4',6-diamidino-2-phenylindole (MESH:C007293), SDS (MESH:D012967), MgCl2 (MESH:D015636), ampicillin (MESH:D000667), NP-40 (MESH:C010615), carbon (MESH:D002244), imidazole (MESH:C029899), oxygen (MESH:D010100), NaMN (MESH:C002953), alanine (MESH:D000409), PVDF (MESH:C024865), citrate (MESH:D019343), 2',7'-dichlorodihydrofluorescein diacetate (MESH:C110400), nitrate (MESH:D009566), C5-branched dibasic acid (-), DTT (MESH:D004229), Deamido-NAD (MESH:C018348), NR (MESH:C018613), chlorophyll (MESH:D002734), NH4Cl (MESH:D000643), NaCl (MESH:D012965), nitrogen (MESH:D009584), mannose (MESH:D008358), formic acid (MESH:C030544), NAM (MESH:D009536), NA (MESH:D009525), NH3 (MESH:D000641), L-aspartate (MESH:D001224), kanamycin (MESH:D007612), sucrose (MESH:D013395), metal (MESH:D008670), ATP (MESH:D000255), iminoaspartate (MESH:C031948), carbohydrate (MESH:D002241), Tween-20 (MESH:D011136), His (MESH:D006639), oil (MESH:D009821), methanol (MESH:D000432), TB (MESH:D013725), Amino acids (MESH:D000596), fructose (MESH:D005632), QA (MESH:D017378), ROS (MESH:D017382), NAD (MESH:D009243), DDT (MESH:D003634)
- **Species:** Nicotiana sylvestris (wood tobacco, species) [taxon 4096], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Synechococcus elongatus PCC 7942 = FACHB-805 (strain) [taxon 1140], Francisella tularensis (species) [taxon 263], Synechococcus elongatus (species) [taxon 32046], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Cyanobacteriota (blue-green algae, phylum) [taxon 1117], uncultured cyanobacterium (species) [taxon 1211]
- **Mutations:** CinA, H16A, H19, H19A, 19A
- **Cell lines:** E. coli BL21 (DE3) — Mus musculus (Mouse), Hybridoma (CVCL_B7HM), pTAC::NMNAT — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_B2FS), S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), DH5a — Drosophila hydei (Fruit fly), Spontaneously immortalized cell line (CVCL_Z531), NC_007604.1 — Homo sapiens (Human), Transformed cell line (CVCL_1874), Escherichia coli — Mus musculus (Mouse), Hybridoma (CVCL_C5CN)

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13036487/full.md

---
Source: https://tomesphere.com/paper/PMC13036487