# Cryo-EM structure of Chlamydomonas reinhardtii Photosystem I complexed with cytochrome c6

**Authors:** Yu Ogawa, Gyana Prakash Mahapatra, Yuval Milrad, Michelle Schimpf, Genji Kurisu, Michael Hippler, Jan Michael Schuller

PMC · DOI: 10.1038/s41467-026-70944-9 · 2026-03-27

## TL;DR

The paper reveals the cryo-EM structure of the Cyt c6:PSI complex in green algae, showing how electrons are transferred to Photosystem I.

## Contribution

The study provides the first cryo-EM structure of Cyt c6 bound to PSI in Chlamydomonas reinhardtii, revealing novel and ancestral interaction features.

## Key findings

- The heme group of Cyt c6 is positioned ~11 Å from P700, stabilized by a helix-loop-helix motif of PSAF.
- Cyt c6 retains an arginine residue (R66) crucial for donor:PSI interactions, forming electrostatic and π(cation)-π interactions.
- The structure reveals evolutionary insights into the replacement of Cyt c6 by plastocyanin in plants.

## Abstract

Photosynthetic electron transfer relies on small soluble carriers that shuttle electrons between the cytochrome b₆f complex and Photosystem I (PSI). While copper-containing plastocyanin (Pc) serves this role in plants, the heme protein cytochrome c₆ (Cyt c₆) is also employed in algae and cyanobacteria. Here, we present a cryo–electron microscopy structure of a Cyt c₆:PSI complex from Chlamydomonas reinhardtii. We observe that the heme group of Cyt c₆ is positioned ~11 Å away from P700, stabilized by extensive contacts involving a N-terminal helix-loop-helix motif of PSAF, characteristic of eukaryotic PSI. Notably, the algal Cyt c₆ also retains an arginine residue (R66) which is crucial for cyanobacterial donor:PSI reactions. Our structure reveals the previously uncharacterized interactions involving this residue; it can form a putative electrostatic contact with PsaB-D623 while also contributing to a tri-planar π(cation)-π interactions with adjacent residues. Our findings provide a structural framework for understanding the mechanism and evolution of donor:PSI interactions.

In photosynthesis, cytochrome c6 (Cyt c6) has been evolutionarily replaced by plastocyanin as the electron donor to Photosystem I (PSI). Here, the authors present the cryo-EM structure Cyt c6: PSI complex from green algae, revealing both novel and ancestral features of donor:PSI interactions.

## Linked entities

- **Proteins:** psaF (photosystem I subunit III), FAAH (fatty acid amide hydrolase)
- **Species:** Chlamydomonas reinhardtii (taxon 3055)

## Full-text entities

- **Genes:** Cyt c6 [NCBI Gene 5723799], PSAF [NCBI Gene 5722300], ferredoxin [NCBI Gene 5716653], PsaA [NCBI Gene 2717000], PsaA [NCBI Gene 9073071], PSAD [NCBI Gene 5723339], PsaB [NCBI Gene 9073070], PSAE [NCBI Gene 5728289], PsaB [NCBI Gene 2717038]
- **Diseases:** PSI (MESH:D006969)
- **Chemicals:** PQ (MESH:D010971), MgSO4 (MESH:D008278), CL0 (-), DAD (MESH:C025953), CHL (MESH:C037184), propane (MESH:D011407), imidazole (MESH:C029899), carbon (MESH:D002244), Phenylmethylsulfonyl fluoride (MESH:D010664), Chloramphenicol (MESH:D002701), KCl (MESH:D011189), N-hydroxysulfosuccinimide (MESH:C035761), plastoquinol (MESH:C003165), sulfo-NHS (MESH:C465543), iron (MESH:D007501), SDS (MESH:D012967), MgCl2 (MESH:D015636), benzamidine (MESH:C032157), beta-carotenes (MESH:D019207), Tricine (MESH:C100184), EDTA (MESH:D004492), glycerol (MESH:D005990), resin (MESH:D012116), Trp (MESH:D014364), agar (MESH:D000362), HEPES (MESH:D006531), lipid (MESH:D008055), xanthophylls (MESH:D024341), NEX (MESH:C011947), ethane (MESH:D004980), esters (MESH:D004952), proton (MESH:D011522), 1-ethyl-3-[3- dimethylaminopropyl] carbodiimide (MESH:D005022), LUT (MESH:D014975), amino acid (MESH:D000596), phylloquinones (MESH:D010837), sucrose (MESH:D013395), HCl (MESH:D006851), ascorbate (MESH:D001205), KOH (MESH:C029943), ATP (MESH:D000255), MOPS (MESH:C008550), chlorophyll (MESH:D002734), P700 (MESH:C001785), DTT (MESH:D004229), water (MESH:D014867), heme (MESH:D006418), copper (MESH:D003300), methyl viologen (MESH:D010269), aminocaproic acid (MESH:D015119), indole (MESH:C030374), NaCl (MESH:D012965), DEAE Sepharose CL-6B (MESH:C043982)
- **Species:** Chlamydomonas reinhardtii (species) [taxon 3055], Synechocystis sp. (species) [taxon 1143], Anabaena sp. (species) [taxon 1167], Lathyrus oleraceus (garden pea, species) [taxon 3888], Escherichia coli (E. coli, species) [taxon 562], PX clade (clade) [taxon 569578], Spinacia oleracea (spinach, species) [taxon 3562]
- **Mutations:** E71Q, R66, E70Q, R66Q, E69Q, Arg/Asp, E70, E71, E69
- **Cell lines:** PCC 7119 — Rattus norvegicus (Rat), Hybridoma (CVCL_A6HH), BL21(DE2) — Homo sapiens (Human), EBV-related Burkitt lymphoma, Cancer cell line (CVCL_M639), pET22b — Mus musculus (Mouse), Adenoma of the mouse pulmonary system, Cancer cell line (CVCL_5U98)

## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13036084/full.md

---
Source: https://tomesphere.com/paper/PMC13036084