# Measurable residual disease testing in acute myeloid leukemia: current state, foundational models, and tools for future development

**Authors:** Joseph Van Galen, Stephen D. Willis, Ashish Bains, Sara H. Small

PMC · DOI: 10.1007/s10555-026-10322-5 · Cancer Metastasis Reviews · 2026-03-27

## TL;DR

This paper reviews the current state and challenges of measurable residual disease testing in acute myeloid leukemia to guide future improvements in treatment personalization.

## Contribution

The paper provides a comprehensive review of MRD testing in AML, highlighting foundational models and tools for future development.

## Key findings

- AML remains difficult to treat due to biological heterogeneity and high relapse rates.
- MRD testing is complicated by uncertainties in disease physiology and overlap with healthy marrow states like CHIP.
- Standardized workflows for MRD implementation are still emerging in clinical guidelines.

## Abstract

Acute myeloid leukemia (AML) is a lethal and rapidly progressive hematologic malignancy with high rates of relapse and treatment refractoriness. Management of AML is complicated by biological heterogeneity in a disease that is broadly defined by the clonal expansion of myeloblasts that otherwise play an important role in healthy marrow tissues. While subtypes of AML are increasingly defined by druggable driver mutations including FLT3-ITD, IDH1, IDH2, and NPM1, conventional chemotherapy and reduced intensity induction regimens (e.g., azacitidine-venetoclax) remain therapeutic backbones. One area of active development for personalization of AML treatment is the assessment of measurable residual disease (MRD). MRD testing in AML is complicated by uncertainty regarding the physiologic compartment of persistent and relapsing myeloblasts, and by increasing recognition of myeloid driver mutations in some healthy bone marrow states, such as clonal hematopoiesis of indeterminate potential (CHIP). Even in large academic centers, MRD tools are not yet universally available. Standardized workflows for MRD implementation are only beginning to enter consensus and guideline documents. Current understanding of AML biology and state-of-the-art tools for MRD measurement are reviewed here in an effort to promote clinical and laboratory investigator collaboration for the development of reliable tools for improving outcomes in this deadly disease. Clinical trial number: not applicable

## Linked entities

- **Genes:** IDH1 (isocitrate dehydrogenase (NADP(+)) 1) [NCBI Gene 3417], IDH2 (isocitrate dehydrogenase (NADP(+)) 2) [NCBI Gene 3418], NPM1 (nucleophosmin 1) [NCBI Gene 4869]
- **Chemicals:** azacitidine (PubChem CID 9444), venetoclax (PubChem CID 49846579)
- **Diseases:** acute myeloid leukemia (MONDO:0015667)

## Full-text entities

- **Genes:** ANPEP (alanyl aminopeptidase, membrane) [NCBI Gene 290] {aka AP-M, AP-N, APN, CD13, GP150, LAP1}, SF3B1 (splicing factor 3b subunit 1) [NCBI Gene 23451] {aka Hsh155, MDS, PRP10, PRPF10, SAP155, SF3b155}, MYH11 (myosin heavy chain 11) [NCBI Gene 4629] {aka AAT4, FAA4, SMHC, SMMHC, SMMS-1, VSCM2}, CEBPZ (CCAAT enhancer binding protein zeta) [NCBI Gene 10153] {aka CBF, CBF2, HSP-CBF, NOC1}, RUNX1 (RUNX family transcription factor 1) [NCBI Gene 861] {aka AML1, AML1-EVI-1, AMLCR1, CBF2alpha, CBFA2, EVI-1}, MLLT3 (MLLT3 super elongation complex subunit) [NCBI Gene 4300] {aka AF9, YEATS3}, U2AF1 (U2 small nuclear RNA auxiliary factor 1) [NCBI Gene 7307] {aka FP793, RN, RNU2AF1, U2AF35, U2AFBP}, IDH2 (isocitrate dehydrogenase (NADP(+)) 2) [NCBI Gene 3418] {aka D2HGA2, ICD-M, IDH, IDH-2, IDHM, IDP}, CD33 (CD33 molecule) [NCBI Gene 945] {aka CD33rSiglec, SIGLEC-3, SIGLEC3, p67}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, PTPRC (protein tyrosine phosphatase receptor type C) [NCBI Gene 5788] {aka B220, CD45, CD45R, GP180, IMD105, L-CA}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, CD34 (CD34 molecule) [NCBI Gene 947], CD7 (CD7 molecule) [NCBI Gene 924] {aka GP40, LEU-9, TP41, Tp40}, NPM1 (nucleophosmin 1) [NCBI Gene 4869] {aka B23, NPM}, KIT (KIT proto-oncogene, receptor tyrosine kinase) [NCBI Gene 3815] {aka C-Kit, CD117, MASTC, PBT, SCFR}, KMT2A (lysine methyltransferase 2A) [NCBI Gene 4297] {aka ALL-1, ALL1, CXXC7, GAS7, HRX, HTRX}, FLT3 (fms related receptor tyrosine kinase 3) [NCBI Gene 2322] {aka CD135, FLK-2, FLK2, STK1}, CBFB (core-binding factor subunit beta) [NCBI Gene 865] {aka CLCD2, PEBP2B}, RUNX1T1 (RUNX1 partner transcriptional co-repressor 1) [NCBI Gene 862] {aka AML1-MTG8, AML1T1, CBFA2T1, CDR, ETO, MTG8}, ZRSR2 (zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2) [NCBI Gene 8233] {aka OFD21, U2AF1-RS2, U2AF1L2, U2AF1RS2, URP, ZC3H22}, NCAM1 (neural cell adhesion molecule 1) [NCBI Gene 4684] {aka CD56, MSK39, NCAM}, IDH1 (isocitrate dehydrogenase (NADP(+)) 1) [NCBI Gene 3417] {aka HEL-216, HEL-S-26, IDCD, IDH, IDP, IDPC}, ASXL1 (ASXL transcriptional regulator 1) [NCBI Gene 171023] {aka BOPS, MDS}, CEBPA (CCAAT enhancer binding protein alpha) [NCBI Gene 1050] {aka C/EBP-alpha, CEBP}, SRSF2 (serine and arginine rich splicing factor 2) [NCBI Gene 6427] {aka PR264, SC-35, SC35, SFRS2, SFRS2A, SRp30b}, ABRA (actin binding Rho activating protein) [NCBI Gene 137735] {aka STARS}
- **Diseases:** chloroma (MESH:D023981), multiple myeloma (MESH:D009101), disseminated intravascular coagulopathy (MESH:D004211), CHIP (MESH:C536227), minimal residual disease (MESH:D018365), chromosomal abnormalities (MESH:D002869), APL (MESH:D015473), infections (MESH:D007239), bleeding (MESH:D006470), AML (MESH:D015470), bruising (MESH:D003288), myeloid disease (MESH:D007951), LAIP leukemia (MESH:D007938), MFC (MESH:D054318), Cancer (MESH:D009369), toxicity (MESH:D064420), fatigue (MESH:D005221), neutropenia (MESH:D009503), anemia (MESH:D000740), lymphoid malignancies (MESH:D008223), tumor lysis syndrome (MESH:D015275), clonal cytopenia (MESH:C580365), acute lymphoblastic leukemia (MESH:D054198), monoclonal gammopathy (MESH:D010265), leukostasis (MESH:D018921), shortness of breath (MESH:D004417), CCUS (MESH:D065309), thrombocytopenia (MESH:D013921), ICUS idiopathic cytopenia (MESH:D006402), hematologic malignancies (MESH:D019337), ARCH (OMIM:217095), MDS (MESH:D009190)
- **Chemicals:** anthracycline (MESH:D018943), enasidenib (MESH:C000605269), olutasidenib (MESH:C000710173), BioRender (-), quizartinib (MESH:C544967), azacitidine (MESH:D001374), midostaurin (MESH:C059539), ivosidenib (MESH:C000627630), venetoclax (MESH:C579720), gilteritinib (MESH:C000609080), cytarabine (MESH:D003561), gemtuzumab-ozogamicin (MESH:D000079982)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

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## References

59 references — full list in the complete paper: https://tomesphere.com/paper/PMC13031212/full.md

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Source: https://tomesphere.com/paper/PMC13031212