# Cellular Responses of Maize Roots to Long-Term Cadmium Exposure: Adjustments of Class III Peroxidases, Plasma Membrane and Tonoplast Sub-Proteomes

**Authors:** Sabine Lüthje, Ayse Gül Yilmaz, Kalaivani Ramanathan, Waldemar Gräfenstein, Jenny M. Tabbert, Stefanie Wienkoop, Katrin Heino, François Clement Perrineau, Sönke Harder

PMC · DOI: 10.3390/proteomes14010011 · Proteomes · 2026-02-25

## TL;DR

This study explores how maize roots adapt to long-term cadmium exposure by analyzing changes in peroxidase activity and membrane proteins.

## Contribution

The study identifies novel peroxidases and membrane transporters involved in cadmium tolerance in maize roots.

## Key findings

- Guaiacol peroxidase activity increased in soluble fractions of cadmium-treated maize roots.
- A Cd2+-specific peroxidase (ZmPrx101) and increased abundance of ZmPrx85 in plasma membranes were identified.
- Proteomic changes included transporters for Cd2+ exclusion and sequestration, along with disease resistance and cell wall modification proteins.

## Abstract

Background: Crop plants have to deal with long-term cadmium exposure to farmlands contaminated by intensive use of fertilizers and pesticides. For uptake and sequestration, Cd2+ has to pass the plasma membrane and tonoplast. Class III peroxidases, plasma membrane, and tonoplast sub-proteomes were studied. Methods: Control and Cd2+-treated maize (Zea mays L.) were grown in hydroponics for 18 days. Soluble peroxidases were partially purified by chromatofocusing and characterized by substrate specificity. Membrane-bound peroxidases were analyzed spectrophotometrically and by non-reducing SDS-PAGE. Soluble and plasma membrane-bound peroxidases were identified by mass spectrometry. Shotgun proteomics was used to identify membrane proteins of differential abundance. Results: Guaiacol peroxidase activities increased in soluble fractions of Cd2+ samples. A Cd2+-specific soluble peroxidase (ZmPrx101) was identified, and ZmPrx85 abundance increased significantly in the plasma membrane. Substrate specificity of peroxidases revealed a preference for ferulic acid and esculetin, which was confirmed by docking analyses. Primary active transporters increased auxin efflux (brachytic2, ABCB9, and ABCB21), Cd2+ exclusion (ABCG34), and sequestration into the vacuole (HMA2, ABCB27). Evaluation of sub-proteome fractions demonstrated significant changes for proteins involved in disease resistance responses and cell wall modification. Conclusions: Molecular adjustments of maize root proteome to long-term Cd2+ exposure revealed relevance of low-abundant proteins for Cd2+ tolerance and putative stress markers.

## Linked entities

- **Genes:** LOC100384057 (PGP1) [NCBI Gene 100384057], ABCB9 (ATP binding cassette subfamily B member 9) [NCBI Gene 23457], ABCB21 (P-glycoprotein 21) [NCBI Gene 825388], ABCG34 (pleiotropic drug resistance 6) [NCBI Gene 818211], HMA2 (heavy metal atpase 2) [NCBI Gene 829134], ABCB27 (transporter associated with antigen processing protein 2) [NCBI Gene 833896]
- **Chemicals:** cadmium (PubChem CID 23973), Cd2+ (PubChem CID 31193), ferulic acid (PubChem CID 445858), esculetin (PubChem CID 5281416)
- **Species:** Zea mays (taxon 4577)

## Full-text entities

- **Genes:** LOC541888 (plasma membrane intrinsic protein 2) [NCBI Gene 541888] {aka GRMZM2G014914, PIP2-1, ZmPIP2-1, pip2e}, class III peroxidase [NCBI Gene 100415851], TIP2;2 [NCBI Gene 541895], NRP1 (NAP1-related protein 1) [NCBI Gene 843797] {aka F1M20.24, F1M20_24, NAP1-related protein 1}, AO1 (Indole-3-acetaldehyde oxidase) [NCBI Gene 542228] {aka GRMZM2G141535, cl1856_2(520), zmAO-1}, PIP [NCBI Gene 541787], LOC542014 (plasma membrane intrinsic protein 1) [NCBI Gene 542014] {aka GRMZM2G081843, PIP1-5, ZmPIP1-5, pip, pip1e, pip4}, TIP [NCBI Gene 100281057], PX domain-containing protein [NCBI Gene 100191880], PPase [NCBI Gene 541666], V-ATPase [NCBI Gene 542327], LOC542619 (plasma membrane intrinsic protein) [NCBI Gene 542619] {aka GRMZM2G178693, ZmPIP2-5, pip2-5}, ubiquitin [NCBI Gene 100192952], phenylalanine ammonia-lyase [NCBI Gene 100285115], elongation factor 1-gamma 3 [NCBI Gene 100282446], Endoglucanase [NCBI Gene 100285574], peroxidase [NCBI Gene 543313], S-adenosylmethionine synthase [NCBI Gene 100282324], Polyneuridine-aldehyde esterase [NCBI Gene 100284061], WRKY1 [NCBI Gene 732738], TIP2;3 [NCBI Gene 541687], Dynamin-related protein 1C [NCBI Gene 100280709], cullin-1 [NCBI Gene 100282292], proteasome subunit alpha type [NCBI Gene 100191224], Peroxidase [NCBI Gene 542029], Lactoylglutathione lyase [NCBI Gene 100283197], 4,5-DOPA dioxygenase extradiol [NCBI Gene 100280732], ABC transporter [NCBI Gene 542680], NRP-1 [NCBI Gene 542131], LOC541675 (tonoplast intrinsic protein 1) [NCBI Gene 541675] {aka TIP1-1, ZmTIP1, tip1}, NRAMP6 (NRAMP metal ion transporter 6) [NCBI Gene 838166] {aka ATNRAMP6, NRAMP metal ion transporter 6, T24D18.6, T24D18_6}, TIP2-1 [NCBI Gene 541894], LOC542328 (vacuolar proton pump homolog 1) [NCBI Gene 542328] {aka GRMZM2G069095, H+-PPase, vpp1}, PIP1;2 [NCBI Gene 541779], aldose reductase [NCBI Gene 100857059], elongation factor 1-alpha [NCBI Gene 541783], Harpin-inducing protein [NCBI Gene 100280654], Protein kinase domain-containing protein [NCBI Gene 100281444], serine/threonine protein kinase [NCBI Gene 103629582], MGT9 (magnesium transporter 9) [NCBI Gene 836577] {aka ATMGT9, MRS2-2, MUB3.8, MUB3_8, magnesium transporter 9}, Short-chain alcohol dehydrogenase1 [NCBI Gene 100282128], LOC541886 (plasma membrane integral protein ZmPIP1-3) [NCBI Gene 541886] {aka GRMZM2G392975, PIP1-3, PIP1-4, ZmPIP1-3, ZmPIP1-4}, Polcalcin Jun o 2 [NCBI Gene 100284929], cinnamyl alcohol dehydrogenase 1 [NCBI Gene 100191885]
- **Diseases:** swelling (MESH:D004487), leaf roll (MESH:D014202), necrosis (MESH:D009336), chlorosis (MESH:D000747), Disease (MESH:D004194), tin tips (MESH:D060725), injury to (MESH:D014947)
- **Chemicals:** chlorophyll (MESH:D002734), IAA (MESH:C030737), ABA (MESH:D000040), eugenols (MESH:D005054), methyl eugenol (MESH:C005223), dextran T500 (MESH:D003911), FeCl3 (MESH:C024555), 2-propanol (MESH:D019840), glycine (MESH:D005998), aluminum (MESH:D000535), dithiothreitol (MESH:D004229), H2O (MESH:D014867), TMB (MESH:C021758), heme (MESH:D006418), formic acid (MESH:C030544), copper (MESH:D003300), Coniferyl alcohol (MESH:C010559), scopoletin (MESH:D012603), NaCl (MESH:D012965), alkaloid (MESH:D000470), sucrose (MESH:D013395), HCl (MESH:D006851), coumarins (MESH:D003374), cellulose (MESH:D002482), Diethanolamine (MESH:C020283), sodium acetate (MESH:D019346), guaiacol (MESH:D006139), Esculetin (MESH:C007628), coumarin (MESH:C030123), 4-chloro-1-naphthol (MESH:C025917), myristicin (MESH:C005246), Tween 20 (MESH:D011136), KOH (MESH:C029943), iodoacetamide (MESH:D007460), brassinosteroid (MESH:D060406), metal (MESH:D008670), Hydrogen peroxide (MESH:D006861), dimethyl sulfoxide (MESH:D004121), methanol (MESH:D000432), Peptides (MESH:D010455), lignans (MESH:D017705), phospholipids (MESH:D010743), phenoxy radical (MESH:C042329), glutathione (MESH:D005978), Fe(III)-EDTA (MESH:C019179), NBT (MESH:C094100), cysteine (MESH:D003545), acetonitrile (MESH:C032159), Magnesium (MESH:D008274), Nicotianamine (MESH:C082893), polyethylene glycol 3350 (MESH:C000595212), phosphate (MESH:D010710), gibberellic acid (MESH:C007842), FA (MESH:D005492), ROS (MESH:D017382), ZnSO4 (MESH:D019287), hemicellulose (MESH:C007916), zinc (MESH:D015032), EDTA (MESH:D004492), indole-3-butyric acid (MESH:C014612)
- **Species:** Spinacia oleracea (spinach, species) [taxon 3562], Vinca minor (common periwinkle, species) [taxon 60093], Hordeum vulgare (barley, species) [taxon 4513], Russula sp. 'IN4' (species) [taxon 2915724], Homo sapiens (human, species) [taxon 9606], Populus tremula x Populus alba (gray poplar, species) [taxon 80863], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Triticum aestivum (bread wheat, species) [taxon 4565], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Zea mays (maize, species) [taxon 4577]
- **Cell lines:** ZmPrx109 — Homo sapiens (Human), Supernumerary circular chromosome, Finite cell line (CVCL_4D75), B6UHJ4 — Mus musculus (Mouse), Hybridoma (CVCL_JZ92), B4FWK0 — Homo sapiens (Human), Familial hypertrophic cardiomyopathy type 26, Induced pluripotent stem cell (CVCL_A6XE)

## Full text

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## Figures

14 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13030655/full.md

## References

114 references — full list in the complete paper: https://tomesphere.com/paper/PMC13030655/full.md

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Source: https://tomesphere.com/paper/PMC13030655