# Development and Evaluation of Compact Semi-Synthetic Promoters for Enhanced Antigen Expression in Adenoviral-Vectored Vaccines

**Authors:** Matěj Hlaváč, Susan J. Morris, Barbara Dema, Marta Ulaszewska, Zakia Al-Hareth, Bruno Douradinha, Sarah C. Gilbert

PMC · DOI: 10.3390/vaccines14030260 · Vaccines · 2026-03-13

## TL;DR

Researchers created smaller, efficient promoters for adenoviral vaccines, which can boost antigen expression without taking up too much space.

## Contribution

The study introduces compact semi-synthetic promoters that match the performance of larger CMV promoters in vaccine vectors.

## Key findings

- cSE3 and cSE5 promoters showed activity comparable to CMV promoters in vitro.
- Vectors with cSE3 and cSE5 induced strong T-cell and IgG responses in mice similar to CMV controls.

## Abstract

Background/Objectives: The large size of commonly used regulatory elements such as the cytomegalovirus (CMV) immediate-early promoter imposes a significant burden on the already restricted payload capacity of first-generation adenoviral vectors, potentially hindering the development of multi-antigen vaccine candidates. To address this limitation, we have engineered a panel of novel, small, semi-synthetic promoters designed to leverage the changes in transcriptomic milieu following adenoviral vector entry. Methods: Eight synthetic enhancer modules (SE1–SE8) were designed in silico, each composed of transcription factor binding sites (TFBSs) previously found in host genes that are upregulated during early adenoviral infection. These synthetic enhancers were coupled with a minimal CMV core promoter to generate a panel of compact semi-synthetic promoters (cSE1–cSE8), and their activity was evaluated in the context of ChAdOx1 viral vectors expressing GFP or a modified Plasmodium falciparum circumsporozoite (CSN) antigen. Promoter performance was characterised in vitro via flow cytometry, RT-qPCR, and Western blotting, and in vivo by quantifying antigen-specific T-cell (IFN-γ ELISpot) and IgG antibody (ELISA) responses in BALB/c mice. Results: In vitro characterisation revealed a wide range of promoter activity across the panel, with cSE3 and cSE5 driving transgene expression levels comparable to the benchmark CMV promoters despite their markedly reduced genomic footprint. In vivo, ChAdOx1 vectors incorporating cSE3 and cSE5 elicited potent antigen-specific T-cell and IgG responses that were comparable to those induced by the larger CMV control promoters. Conclusions: We have successfully developed semi-synthetic promoters that match the potency of the much larger, frequently used CMV promoters whilst simultaneously reducing genomic footprint. These novel regulatory elements will facilitate the design of next-generation vaccines, particularly those requiring large antigens or multi-antigen cassettes.

## Linked entities

- **Proteins:** NAL1 (Protein NARROW LEAF 1), IFNG (interferon gamma), IGG (Immunoglobulin G level)

## Full-text entities

- **Genes:** Dbp (D site albumin promoter binding protein) [NCBI Gene 13170], Nfkb1 (nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105) [NCBI Gene 18033] {aka NF-KB1, NF-kappaB, NF-kappaB1, p105, p50, p50/p105}, Cth (cystathionine gamma lyase) [NCBI Gene 107869] {aka 0610010I13Rik, CGL, CSE, Cys3}, Sp1 (trans-acting transcription factor 1) [NCBI Gene 20683] {aka 1110003E12Rik, Sp1-1}, Nfe2l2 (nuclear factor, erythroid derived 2, like 2) [NCBI Gene 18024] {aka Nrf2}, Jun (Jun proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 16476] {aka AP-1, Junc, c-jun}, Irf7 (interferon regulatory factor 7) [NCBI Gene 54123], IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, Rela (Rela proto-oncogene, NFKB subunit) [NCBI Gene 19697] {aka p65, p65 NF-kappa B, p65 NFkB}, Irf3 (interferon regulatory factor 3) [NCBI Gene 54131] {aka C920001K05Rik, IRF-3}, Ifng (interferon gamma) [NCBI Gene 15978] {aka IFN-g, If2f, Ifg}, Sting1 (stimulator of interferon response cGAMP interactor 1) [NCBI Gene 72512] {aka 2610307O08Rik, ERIS, MPYS, Mita, STING, STING-beta}, Gapdh (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 14433] {aka Gapd}, Fos (Fos proto-oncogene, AP-1 transcription factor subunit) [NCBI Gene 14281] {aka D12Rfj1, c-fos, cFos}, Cgas (cyclic GMP-AMP synthase) [NCBI Gene 214763] {aka E330016A19Rik, Mb21d1}, DBP (D-box binding PAR bZIP transcription factor) [NCBI Gene 100685867], Rel (Rel proto-oncogene, NFKB subunit) [NCBI Gene 19696] {aka c-Rel}, Cebpb (CCAAT/enhancer binding protein beta) [NCBI Gene 12608] {aka C/EBPbeta, CRP2, IL-6DBP, LAP, LIP, NF-IL6}, Gzma (granzyme A) [NCBI Gene 14938] {aka Ctla-3, Ctla3, Hf, Hf1, SE1, TSP-1}, Relb (Relb proto-oncogene, NFKB subunit) [NCBI Gene 19698] {aka shep}, Tlr9 (toll-like receptor 9) [NCBI Gene 81897]
- **Diseases:** toxicity (MESH:D064420), CMV (MESH:D003586), injury to (MESH:D014947), AdV infection (MESH:D007239), Malaria (MESH:D008288), SE (MESH:C564835), COVID-19 (MESH:D000086382), inflammatory (MESH:D007249), neglected tropical diseases (MESH:D058069)
- **Chemicals:** paraformaldehyde (MESH:C003043), PVDF (MESH:C024865), streptomycin (MESH:D013307), CSN (-), L-glutamine (MESH:D005973), Lipofectamine  2000 (MESH:C086724), tetracycline (MESH:D013752), DTT (MESH:D004229), dioxin (MESH:D004147), IsoFlo (MESH:D007530), penicillin (MESH:D010406), PBS (MESH:D007854)
- **Species:** Homo sapiens (human, species) [taxon 9606], Chimpanzee adenovirus (species) [taxon 310542], Adeno-associated virus (species) [taxon 272636], Bos taurus (bovine, species) [taxon 9913], Mus musculus (house mouse, species) [taxon 10090], Human adenovirus sp. (species) [taxon 1907210], Ebola virus [taxon 186536], Rous sarcoma virus (no rank) [taxon 11886], Lassa virus [taxon 11620], Plasmodium falciparum (malaria parasite P. falciparum, species) [taxon 5833], Cytomegalovirus (genus) [taxon 10358], Plasmodium berghei (species) [taxon 5821], Adenoviridae (family) [taxon 10508]
- **Cell lines:** HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030), Huh7 — Homo sapiens (Human), Adult hepatocellular carcinoma, Cancer cell line (CVCL_0336), ChAdOx1 — Mus musculus (Mouse), Hybridoma (CVCL_C7RB), T-REx -293 — Homo sapiens (Human), Transformed cell line (CVCL_D585), A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13030575/full.md

## References

30 references — full list in the complete paper: https://tomesphere.com/paper/PMC13030575/full.md

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Source: https://tomesphere.com/paper/PMC13030575