# Environmental Drivers and Explainable Modeling to Resolve Trace Metal Dynamics in a Lotic System

**Authors:** Akasya Topçu, Dilara Gerdan Koç, İlknur Meriç Turgut, Serkan Taşdemir

PMC · DOI: 10.3390/toxics14030215 · Toxics · 2026-02-28

## TL;DR

This study uses machine learning to understand how environmental factors influence trace metal levels in a stream affected by human activity.

## Contribution

The study introduces an integrative computational framework to model and explain trace metal dynamics in lotic systems.

## Key findings

- Machine learning models accurately predicted trace metal concentrations with R2 values generally above 0.95.
- Environmental factors like temperature, NO2−, and redox conditions showed metal-specific control over trace metal dynamics.
- Trace metal distributions are primarily influenced by environmental sensitivity rather than uniform pollution sources.

## Abstract

Trace metal contamination in lotic freshwater systems exhibits pronounced heterogeneity arising from coupled hydrological connectivity, geochemical partitioning, and anthropogenic forcing, complicating exposure characterization in urban and peri-urban catchments. Addressing this complexity requires integrative analytical approaches capable of deciphering system-level controls, prompting an investigation of the environmental structuring and governing controls of dissolved trace metal signatures in a human-impacted stream using a system-oriented computational framework. To capture temporal variability associated with seasonal hydrological contrasts and heterogeneous pollution inputs, a station-based, season-resolved sampling strategy was implemented during the wet and dry seasons. Physicochemical gradients (pH, temperature, dissolved oxygen, and electrical conductivity), inorganic nitrogen species (NH3, NO2−, and NO3−), and phosphorus fractions (total phosphorus, TP; total orthophosphate, TOP; soluble reactive P, SRP) were jointly analyzed with dissolved concentrations of chromium (Cr), copper (Cu), nickel (Ni), lead (Pb), cadmium (Cd), mercury (Hg), and arsenic (As). Regression-based machine learning models were used to quantify element-specific sensitivities to hydrochemical drivers under wet–dry periods and to identify optimal predictive configurations. Predictive performance was consistently high for trace metals (R2 generally >0.95), with Random Forest providing the best accuracy for Cr, Ni, Pb, Cd, As, and Hg, whereas Cu was most reliably captured by an XGBoost tree ensemble (R2 = 0.994). Explainability analyses revealed heterogeneous, metal-specific control regimes: Cr was primarily driven by temperature, Ni by NO2− and redox-sensitive conditions, Cd by NH3 and temperature, and As by Hg in combination with phosphorus-related and redox-linked proxies, while Pb showed comparatively lower predictability relative to other metals. Trace metal distributions are therefore structured primarily by differential environmental sensitivity rather than uniform source-driven inputs, reinforcing the need for integrative computational frameworks when interpreting freshwater contamination under intensifying anthropogenic and climatic pressures.

## Linked entities

- **Chemicals:** Cr (PubChem CID 23976), Cu (PubChem CID 23978), Ni (PubChem CID 934), Pb (PubChem CID 5352425), Cd (PubChem CID 23973), Hg (PubChem CID 23931), As (PubChem CID 1549433), NH3 (PubChem CID 222), NO2− (PubChem CID 946), NO3− (PubChem CID 943), TP (PubChem CID 9834371), SRP (PubChem CID 5289403)

## Full-text entities

- **Diseases:** Cd (MESH:D002105), injury to (MESH:D014947)
- **Chemicals:** nitrite (MESH:D009573), Zn (MESH:D015032), iron (MESH:D007501), As (MESH:D001151), oxygen (MESH:D010100), polyethylene (MESH:D020959), Hg (MESH:D008628), carbon (MESH:D002244), Cr (MESH:D002857), manganese (MESH:D008345), polyvinylidene fluoride (MESH:C024865), sulfate (MESH:D013431), Cd (MESH:D002104), nitrate (MESH:D009566), Inorganic nitrogen (-), Ni (MESH:D009532), water (MESH:D014867), Phosphorus (MESH:D010758), Cu (MESH:D003300), Nitrogen (MESH:D009584), Ammonia (MESH:D000641), TOP (MESH:C015535), ascorbic acid (MESH:D001205), sulfanilic acid (MESH:D013425), Metal (MESH:D008670), NO2- (MESH:D009585), Pb (MESH:D007854), NO3- (MESH:C038619), brucine (MESH:C083806), alpha-naphthylamine (MESH:D015057), orthophosphate (MESH:D010710)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13029825/full.md

## References

59 references — full list in the complete paper: https://tomesphere.com/paper/PMC13029825/full.md

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Source: https://tomesphere.com/paper/PMC13029825