# Brewed Coffee and Its Components Act Through Orphan Nuclear Receptor 4A1 (NR4A1)

**Authors:** Amanuel Hailemariam, Srijana Upadhyay, Arafat Rahman Oany, Wai Ning Tiffany Tsui, Vinod Srivastava, Gargi Sivaram, Kelly Churion, Robert S. Chapkin, Laurie A. Davidson, Shoshana Eitan, James J. Cai, Roger Norton, Stephen Safe

PMC · DOI: 10.3390/nu18060877 · Nutrients · 2026-03-10

## TL;DR

Brewed coffee and its polyphenolic compounds interact with NR4A1, a receptor linked to health benefits, suggesting a mechanism for coffee's protective effects.

## Contribution

This study identifies NR4A1 as a target for brewed coffee and its components, revealing a novel pathway for coffee's health effects.

## Key findings

- Brewed coffee and polyphenolics like caffeic acid and ferulic acid bind to NR4A1 with high affinity.
- NR4A1-dependent growth inhibition in Rh30 cells is reduced in NR4A1-deficient cells.
- Polyphenolics exhibit inverse agonist activity on NR4A1, influencing gene responses and inflammation.

## Abstract

Background/Objective: Coffee is the most highly consumed beverage worldwide, and coffee drinkers exhibit decreased mortality and protection from aging-related diseases. This study investigates the role of orphan nuclear receptor 4A1 (NR4A1) in mediating the effects of brewed coffee and the major polyphenolic and polyhydroxy compounds in brewed coffee and also in determining their binding to NR4A1. Methods: The interactions of brewed coffee and several of the major individual compounds in brewed coffee with the ligand-binding domain of NR4A1 were determined using a fluorescent binding assay. For specific compounds, binding was also carried out by surface plasmon resonance, and molecular docking studies were also performed. NR4A1-responsive Rh30 cancer cells were used as models to determine NR4A1-dependent transactivation, cell growth inhibition and inhibition of specific gene products, and in some studies, knockdown of NR4A1 by RNA interference was also determined. Inhibition of lipopolysaccharide-induced IkBα by key polyphenolics was also investigated in RAW264.7 macrophages. Results: Brewed coffee and several polyphenolics, including caffeic acid, ferulic acid, chlorogenic acid, p-coumaric acid, several cinnamic acid derivatives, kahweol, and cafestrol, bound NR4A1 in binding assays, and most Kd values were <10 µM. Brewed coffee and the major polyphenolics inhibited growth of NR4A1-responsive Rh30 cells, and this was attenuated in NR4A1-deficient Rh30 cells. These same compounds also exhibited NR4A1-dependent effects on transactivation and gene product responses in Rh30 and RAW264.7 macrophages and exhibited inverse NR4A1 agonist activity. In contrast, the NR4A1-dependent activity of caffeine and quinic acid was highly variable, suggesting that they are selective NR4A1 ligands. Conclusions: The results of this study demonstrate that brewed coffee and its major polyphenolics and polyhydroxy constituents are NR4A1 ligands and that NR4A1 may play an important role in the health-protective effects of coffee. These results, coupled with recent studies, indicate that NR4A1 and its ligands may play an important role in diet and health.

## Linked entities

- **Genes:** NR4A1 (nuclear receptor subfamily 4 group A member 1) [NCBI Gene 3164]
- **Chemicals:** caffeic acid (PubChem CID 689043), ferulic acid (PubChem CID 445858), chlorogenic acid (PubChem CID 1794427), p-coumaric acid (PubChem CID 637542), cinnamic acid (PubChem CID 444539), kahweol (PubChem CID 114778), caffeine (PubChem CID 2519), quinic acid (PubChem CID 6508)

## Full-text entities

- **Genes:** Nfkbia (nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha) [NCBI Gene 18035] {aka Nfkbi}, Nr4a1 (nuclear receptor subfamily 4, group A, member 1) [NCBI Gene 15370] {aka GFRP1, Gfrp, Hbr-1, Hbr1, Hmr, N10}
- **Diseases:** cancer (MESH:D009369)
- **Chemicals:** caffeic acid (MESH:C040048), chlorogenic acid (MESH:D002726), p-coumaric acid (MESH:C495469), quinic acid (MESH:D011801), lipopolysaccharide (MESH:D008070), kahweol (MESH:C053401), ferulic acid (MESH:C004999), Brewed coffee (-), cinnamic acid (MESH:C029010), caffeine (MESH:D002110)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13029766/full.md

## References

73 references — full list in the complete paper: https://tomesphere.com/paper/PMC13029766/full.md

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Source: https://tomesphere.com/paper/PMC13029766