# Association Between Gut Microbiota and HIV Infection Risk: Insights from Mendelian Randomization and 16S rRNA Amplicon Sequencing

**Authors:** Jiali Chen, Tingting Yuan, Ji Pu, Ying Li, Han Zheng, Jing Yang, Jianguo Xu

PMC · DOI: 10.3390/microorganisms14030667 · Microorganisms · 2026-03-15

## TL;DR

This study finds a link between gut microbes and HIV infection risk, suggesting some bacteria may increase or decrease the risk.

## Contribution

The study identifies specific gut microbial taxa with causal associations to HIV infection using MR and 16S rRNA sequencing.

## Key findings

- Eight gut microbial taxa were found to distinguish between HIV-positive individuals and healthy controls.
- Four taxa showed negative associations and four showed positive associations with HIV infection risk.
- Ruminococcus callidus partially influences HIV risk through hypoxanthine mediation.

## Abstract

Observational evidence links gut microbiota (GM) dysbiosis to HIV infection; however, the causal relationship between them has not been established. Mendelian randomization (MR) and 16S rRNA gene sequencing analyses were performed to identify gut microbial taxa associated with HIV infection risk. MR analysis results identified 18 gut microbial taxa associated with HIV infection (p values < 0.05), of which 16 taxa were detected in the 16S rRNA gene sequencing data. Following the exclusion of seven taxa with low relative abundance, eight taxa with potential relationships with HIV infection were detected in the 16S rRNA gene sequencing data. Four taxa (Clostridia class, Erysipelotrichales order, Paraprevotella genus, and Parabacteroides distasonis species) showed negative associations and four others (Proteobacteria phylum, Coriobacteriaceae family, Subdoligranulum genus, and Bacteroides ovatus species) showed positive associations with HIV infection risk. The eight taxa effectively distinguished between healthy controls (HCs) and people with HIV (PWH) (p values < 0.05). The area under the curve (AUC) values for the ROC curve analysis ranged from 0.62 to 0.87 for differentiating the HC and PWH groups. Furthermore, the effect of Ruminococcus callidus on HIV infection was partially mediated by hypoxanthine, exhibiting a mediated effect β of 0.17 (p = 0.042). These findings highlight the important role of the GM in HIV infection risk, facilitating future studies exploring better GM regulation strategies against HIV infection risk.

## Linked entities

- **Chemicals:** hypoxanthine (PubChem CID 135398638)
- **Diseases:** HIV infection (MONDO:0005109)

## Full-text entities

- **Diseases:** HIV Infection (MESH:D015658)
- **Chemicals:** hypoxanthine (MESH:D019271)
- **Species:** Human immunodeficiency virus 1 (no rank) [taxon 11676], Parabacteroides distasonis (species) [taxon 823], Homo sapiens (human, species) [taxon 9606], Bacteroides ovatus (species) [taxon 28116], Clostridia (class) [taxon 186801], Paraprevotella (genus) [taxon 577309], Subdoligranulum (genus) [taxon 292632], Ruminococcus callidus (species) [taxon 40519]

## Full text

_Full body text omitted from this summary view._ Fetch the complete paper as Markdown: https://tomesphere.com/paper/PMC13029254/full.md

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13029254/full.md

## References

53 references — full list in the complete paper: https://tomesphere.com/paper/PMC13029254/full.md

---
Source: https://tomesphere.com/paper/PMC13029254