# Metabolomic Profiling of Tyrosine Kinase Inhibitor-Induced Endothelial Dysfunction and Cardiovascular Toxicity

**Authors:** Gurkaranvir Singh, Inderjeet Bharaj, Joey Bettencourt, Amarjit Kaur Sekhon, Gurparvesh Singh, Aaron Sidhu, Emanuel Zayas Diaz, Sulaiman Paika, Ariel De Leon, Ajit Brar, Gursimran Brar, Inderbir Padda, Ambar Andrade

PMC · DOI: 10.3390/metabo16030200 · Metabolites · 2026-03-17

## TL;DR

This paper explores how tyrosine kinase inhibitors used in cancer treatment cause heart problems by analyzing metabolic changes and proposes ways to detect and prevent these issues early.

## Contribution

The study identifies novel metabolomic signatures of TKI-induced cardiovascular toxicity and proposes metabolomics-guided strategies for cardioprotection.

## Key findings

- Metabolomic profiling reveals three key axes of TKI-induced cardiovascular toxicity: mitochondrial dysfunction, endothelial nitric oxide disruption, and inflammation.
- Rodent models of sunitinib and sorafenib show metabolomic signatures matching human data and demonstrate heart injury and dysfunction.
- L-carnitine and AMPK signaling restoration in preclinical models supports metabolomics-guided cardioprotection.

## Abstract

Background: Tyrosine kinase inhibitors (TKIs) have transformed cancer therapy; however, they are associated with cardiovascular toxicity. Metabolomics provides a comprehensive framework for identifying early biochemical disruptions that precede clinical manifestations and for formulating mechanism-based intervention strategies. Methods: We conducted a narrative synthesis of published preclinical and translational studies on TKI cardiotoxicity, focusing on untargeted and targeted metabolomic findings and complementary proteomic and transcriptomic data. Functional validation was performed using rodent and cellular models. Mechanistic themes were identified, and implications for biomarker panels, multi-omic integration, and metabolomics-guided interventions were proposed. Conclusions: Metabolomic analyses of various TKIs identified convergent signatures along three interconnected axes: (1) mitochondrial bioenergetic dysfunction characterized by impaired long-chain fatty acid oxidation and adenylate depletion; (2) disruption of endothelial nitric oxide signaling with redox imbalance, including increased nitrotyrosine, Nox activation, and eNOS uncoupling; and (3) an inflammatory metabolic profile marked by elevated branched-chain and aromatic amino acids, creatine, and osmolytes. Rodent models of sunitinib and sorafenib replicate these signatures and demonstrate histological injury, contractile dysfunction, and fibrosis. Preclinical intervention data, particularly restoration of myocardial carnitine, AMPK signaling, and fatty acid oxidation by L-carnitine, provide proof of concept for metabolomics-guided cardioprotection. Metabolomics can identify mechanistic biomarkers that facilitate the early detection, risk stratification, and targeted prevention of TKI-induced cardiovascular injury. Translation into precision cardio-oncology requires prospective validation, standardized assays, and biomarker-driven interventional trials.

## Linked entities

- **Proteins:** NOS3 (nitric oxide synthase 3), PRKAA1 (protein kinase AMP-activated catalytic subunit alpha 1)
- **Chemicals:** L-carnitine (PubChem CID 288), nitrotyrosine (PubChem CID 65124), creatine (PubChem CID 586)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** ROS1 (ROS proto-oncogene 1, receptor tyrosine kinase) [NCBI Gene 6098] {aka MCF3, ROS, c-ros-1}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, FLT3 (fms related receptor tyrosine kinase 3) [NCBI Gene 2322] {aka CD135, FLK-2, FLK2, STK1}, NOS3 (nitric oxide synthase 3) [NCBI Gene 4846] {aka EC-NOS, ECNOS, MYMY8, NOSIII, cNOS, eNOS}, IL10 (interleukin 10) [NCBI Gene 3586] {aka CSIF, GVHDS, IL-10, IL10A, TGIF}, ACACB (acetyl-CoA carboxylase beta) [NCBI Gene 32] {aka ACACbeta, ACC-beta, ACC2, ACCB, ACCbeta, HACC275}, SLC22A5 (solute carrier family 22 member 5) [NCBI Gene 6584] {aka CDSP, OCTN2}, VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422] {aka L-VEGF, MVCD1, VEGF, VPF}, NFAT5 (nuclear factor of activated T cells 5) [NCBI Gene 10725] {aka NF-AT5, NFATL1, NFATZ, OREBP, TONEBP}, CAMK2G (calcium/calmodulin dependent protein kinase II gamma) [NCBI Gene 818] {aka CAMK, CAMK-II, CAMKG, MRD59}, KDR (kinase insert domain receptor) [NCBI Gene 3791] {aka CD309, FLK1, VEGFR, VEGFR2}, NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780] {aka IMDDHH, NRF2, Nrf-2}, BTK (Bruton tyrosine kinase) [NCBI Gene 695] {aka AGMX1, AT, ATK, BPK, IGHD3, IMD1}, EDN1 (endothelin 1) [NCBI Gene 1906] {aka ARCND3, ET1, HDLCQ7, PPET1, QME}, Eif2a (eukaryotic translation initiation factor 2A) [NCBI Gene 229317] {aka D030048D22, D3Ertd194e}, CACNA1C (calcium voltage-gated channel subunit alpha1 C) [NCBI Gene 775] {aka CACH2, CACN2, CACNA1C-IT2, CACNL1A1, CCHL1A1, CaV1.2}, Akt1 (Akt serine/threonine kinase 1) [NCBI Gene 11651] {aka Akt, LTR-akt, PKB, PKB/Akt, PKBalpha, Rac}, ABL1 (ABL proto-oncogene 1, non-receptor tyrosine kinase) [NCBI Gene 25] {aka ABL, BCR-ABL, CHDSKM, JTK7, bcr/abl, c-ABL}, MMP9 (matrix metallopeptidase 9) [NCBI Gene 4318] {aka CLG4B, GELB, MANDP2, MMP-9}, ALK (ALK receptor tyrosine kinase) [NCBI Gene 238] {aka ALK1, CD246, NBLST3}, Cpt1a (carnitine palmitoyltransferase 1a, liver) [NCBI Gene 12894] {aka C730027G07, CPTI, Cpt1}, Pln (phospholamban) [NCBI Gene 18821] {aka Plb}, ICAM1 (intercellular adhesion molecule 1) [NCBI Gene 3383] {aka BB2, CD54, P3.58}, PDGFRB (platelet derived growth factor receptor beta) [NCBI Gene 5159] {aka CD140B, IBGC4, IMF1, JTK12, KOGS, OPDKD}, SLTM (SAFB like transcription modulator) [NCBI Gene 79811] {aka Met}, PRKAA2 (protein kinase AMP-activated catalytic subunit alpha 2) [NCBI Gene 5563] {aka AMPK, AMPK2, AMPKa2, PRKAA}, RET (ret proto-oncogene) [NCBI Gene 5979] {aka CDHF12, CDHR16, HSCR1, MEN2A, MEN2B, MTC1}, VCAM1 (vascular cell adhesion molecule 1) [NCBI Gene 7412] {aka CD106, INCAM-100}, Pik3r1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 18708] {aka PI3K, p50alpha, p55alpha, p85alpha}, Acacb (acetyl-Coenzyme A carboxylase beta) [NCBI Gene 100705] {aka Acc2, Accb}, CRP (C-reactive protein) [NCBI Gene 1401] {aka PTX1}, CYBB (cytochrome b-245 beta chain) [NCBI Gene 1536] {aka AMCBX2, CGD, CGDX, GP91-1, GP91-PHOX, GP91PHOX}, MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594] {aka ERK, ERK-2, ERK2, ERT1, MAPK2, NS13}, EGFR (epidermal growth factor receptor) [NCBI Gene 1956] {aka ERBB, ERBB1, ERRP, HER1, NISBD2, NNCIS}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, CPT2 (carnitine palmitoyltransferase 2) [NCBI Gene 1376] {aka CPT1, CPTASE, IIAE4}, Nos3 (nitric oxide synthase 3, endothelial cell) [NCBI Gene 18127] {aka 2310065A03Rik, Nos-3, eNOS, ecNOS}, KCNH2 (potassium voltage-gated channel subfamily H member 2) [NCBI Gene 3757] {aka ERG-1, ERG1, H-ERG, HERG, HERG1, Kv11.1}, SCN5A (sodium voltage-gated channel alpha subunit 5) [NCBI Gene 6331] {aka CDCD2, CMD1E, CMPD2, HB1, HB2, HBBD}, ERBB2 (erb-b2 receptor tyrosine kinase 2) [NCBI Gene 2064] {aka CD340, HER-2, HER-2/neu, HER2, MLN 19, MLN-19}, Eif2ak3 (eukaryotic translation initiation factor 2 alpha kinase 3) [NCBI Gene 13666] {aka Pek, Perk}, Ppargc1a (peroxisome proliferative activated receptor, gamma, coactivator 1 alpha) [NCBI Gene 19017] {aka A830037N07Rik, Gm11133, PGC-1, PPARGC-1-alpha, Pgc-1alpha, Pgc1}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}
- **Diseases:** hypertrophy (MESH:D006984), Hypertension (MESH:D006973), thromboembolism (MESH:D013923), mucositis (MESH:D052016), calcium (MESH:D002128), heart failure (MESH:D006333), diarrhea (MESH:D003967), Cardiotoxicity (MESH:D066126), necrosis (MESH:D009336), renal cell carcinoma (MESH:D002292), myocardial ischemia (MESH:D017202), Cardiovasc Toxicol 2019 (MESH:D000086382), diastolic dysfunction (MESH:D018487), acute declines in left ventricular function (MESH:D040701), thrombosis (MESH:D013927), Inflammatory (MESH:D007249), chronic myeloid leukemia (MESH:D015464), arrhythmia (MESH:D001145), thrombocytopenia (MESH:D013921), Endothelial Dysfunction (MESH:D014652), thyroid cancer (MESH:D013964), sudden cardiac death (MESH:D016757), mitochondrial fragmentation (MESH:D012892), atrial fibrillation (MESH:D001281), myocardial infarction (MESH:D009203), ischemic (MESH:D002545), proteinuria (MESH:D011507), metabolic derangement (MESH:D008659), DILI (MESH:D056486), systolic/diastolic dysfunction (MESH:D054144), hand-foot skin reaction (MESH:D060831), Cancer (MESH:D009369), acute hepatic failure (MESH:D017114), arterial thrombosis (MESH:D002341), fibrosis (MESH:D005355), non-small cell lung cancer (MESH:D002289), cardiomyocyte damage (MESH:D020263), Cardiovascular (CV) complications (MESH:D002318), Toxicity (MESH:D064420), energetic insufficiency (MESH:D000309), hepatocellular carcinoma (MESH:D006528), Dermatological (MESH:D000168), anemia (MESH:D000740), QT prolongation (MESH:D008133), neutropenia (MESH:D009503), vascular occlusive disease (MESH:D008641), ischemia (MESH:D007511), cardiomyopathy (MESH:D009202), atherosclerosis (MESH:D050197), gastrointestinal toxicities (MESH:D005767), microvascular impairment (MESH:D017566), mitochondrial (MESH:D028361), diabetes (MESH:D003920), venous thromboembolism (MESH:D054556), carnitine deficiency (MESH:C536778), Arterial and venous thrombotic (MESH:D020246), coronary artery disease (MESH:D003324), cachexia (MESH:D002100), Hematological toxicities (MESH:D006402), oncologic (MESH:D000072716)
- **Chemicals:** sulfur (MESH:D013455), acetyl-CoA (MESH:D000105), osimertinib (MESH:C000596361), bosutinib (MESH:C471992), eicosapentaenoic acid (MESH:D015118), kynurenine (MESH:D007737), acyl-carnitine (MESH:C116917), CO2 (MESH:D002245), aromatic amino acids (MESH:D024322), ruxolitinib (MESH:C540383), metformin (MESH:D008687), BH4 (MESH:C003402), Taurine (MESH:D013654), flavin adenine dinucleotide (MESH:D005182), ATP (MESH:D000255), alectinib (MESH:C582670), Sunitinib (MESH:D000077210), 1-methyl histidine (MESH:C028120), erlotinib (MESH:D000069347), vandetanib (MESH:C452423), fedratinib (MESH:C528327), Sorafenib (MESH:D000077157), urea (MESH:D014508), nitrogen (MESH:D009584), pralsetinib (MESH:C000655704), tyrosine (MESH:D014443), homocysteine (MESH:D006710), dasatinib (MESH:D000069439), acyl-CoA (MESH:D000214), CoA (MESH:D003065), alpha-ketoglutaric acid (MESH:D007656), axitinib (MESH:D000077784), PUFA (MESH:D005231), creatinine (MESH:D003404), lenvatinib (MESH:C531958), ROS (MESH:D017382), reactive nitrogen species (MESH:D026361), NADH (MESH:D009243), afatinib (MESH:D000077716), lorlatinib (MESH:C000590786), DHA (MESH:D004281), crizotinib (MESH:D000077547), palbociclib (MESH:C500026), glutamic acid (MESH:D018698), H2O2 (MESH:D006861), acetylcarnitine (MESH:D000108), cabozantinib (MESH:C558660), inosine (MESH:D007288), ponatinib (MESH:C545373), omega-3 fatty acid (MESH:D015525), midostaurin (MESH:C059539), 3-indolepropionic acid (MESH:C095446), arachidonic acid (MESH:D016718), cysteine (MESH:D003545), phospholipid (MESH:D010743), glutathione (MESH:D005978), AA (MESH:D000596), nitrotyrosine (MESH:C002744), malonyl-CoA (MESH:D008316), erdafitinib (MESH:C000604580)
- **Species:** Homo sapiens (human, species) [taxon 9606], Rodentia (rodent, order) [taxon 9989], Mus musculus (house mouse, species) [taxon 10090]
- **Mutations:** Leu/Ile, glutamine/glutamate, threonine rather than tyrosine
- **Cell lines:** /N — Homo sapiens (Human), Finite cell line (CVCL_UZ57)

## Full text

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## Figures

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## References

100 references — full list in the complete paper: https://tomesphere.com/paper/PMC13029070/full.md

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Source: https://tomesphere.com/paper/PMC13029070