# Comprehensive In Silico Investigation of L-Glutamine Transporters and Metabolism in Glioblastoma

**Authors:** Sachin Kumar, Chih-Yang Wang, Helena Kishore Lalwani, Juan Lorell Ngadio, Fitria Sari Wulandari, Daniel Dahlak Solomon, Hui-Pu Liu

PMC · DOI: 10.3390/ph19030455 · Pharmaceuticals · 2026-03-11

## TL;DR

This study identifies key metabolic regulators linked to glutamine in glioblastoma, offering potential targets for treatment.

## Contribution

The paper introduces three novel glutamine-associated metabolic regulators with clinical relevance in glioblastoma.

## Key findings

- Ceruloplasmin (CP) is associated with redox regulation and poor clinical outcomes in GBM.
- SLC25A13 is linked to mitochondrial metabolite exchange and nucleotide biosynthesis.
- SLC38A2 is connected to glutamine uptake and growth signaling in GBM.

## Abstract

Background/Objectives: Glioblastoma (GBM) is the most aggressive primary brain tumor in adults and remains associated with poor prognosis despite multimodal therapy. Metabolic reprogramming, particularly increased dependence on glutamine, supports GBM bioenergetic, biosynthetic, and redox demands. This study aimed to systematically identify glutamine-associated metabolic regulators with prognostic relevance and biological plausibility in GBM. Methods: Transcriptomic data from TCGA and GTEx were analyzed using GEPIA2, with survival validation performed using the CGGA. Functional pathway enrichment, protein expression assessment, protein–protein interaction network analysis, tumor microenvironment evaluation, epigenetic profiling, and single-cell RNA sequencing validation were integrated to contextualize candidate genes. Pharmacogenomic correlation analysis and structure-based molecular docking were applied as supportive validation layers. Results: Ceruloplasmin (CP), Solute Carrier Family 25 Member 13 (SLC25A13), and Solute Carrier Family 38 Member 2 (SLC38A2) were selectively dysregulated and associated with poor clinical outcomes in GBM. CP was linked to redox regulation and stress-adaptive survival programs, SLC25A13 to mitochondrial metabolite exchange and glutamine-coupled nucleotide biosynthesis, and SLC38A2 to glutamine uptake, nutrient sensing, and mTORC1-MYC-associated growth signaling. Conclusions: CP, SLC25A13, and SLC38A2 emerge as clinically relevant glutamine-associated metabolic regulators in GBM, linking redox regulation, mitochondrial metabolite exchange, and glutamine-driven growth signaling. These findings highlight transport- and exchange-centered metabolic nodes as potential biomarkers and candidates for future metabolic targeting in GBM.

## Linked entities

- **Genes:** CP (ceruloplasmin) [NCBI Gene 1356], SLC25A13 (solute carrier family 25 member 13) [NCBI Gene 10165], SLC38A2 (solute carrier family 38 member 2) [NCBI Gene 54407]
- **Diseases:** Glioblastoma (MONDO:0018177), GBM (MONDO:0018177)

## Full-text entities

- **Genes:** SLC25A13 (solute carrier family 25 member 13) [NCBI Gene 10165] {aka ARALAR2, CITRIN, CTLN2, NICCD}, SLC38A2 (solute carrier family 38 member 2) [NCBI Gene 54407] {aka ATA2, PRO1068, SAT2, SNAT2}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, CP (ceruloplasmin) [NCBI Gene 1356] {aka AB073614, CP-2}
- **Diseases:** brain tumor (MESH:D001932), GBM (MESH:D005909), tumor (MESH:D009369)
- **Chemicals:** glutamine (MESH:D005973), nucleotide (MESH:D009711)

## Full text

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## Figures

14 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13028963/full.md

## References

42 references — full list in the complete paper: https://tomesphere.com/paper/PMC13028963/full.md

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Source: https://tomesphere.com/paper/PMC13028963