# Morphological Diversity and Preliminary DNA Barcoding of Xylaria (Xylariales) from Estación Científica San Francisco, Including Xylaria aenea as a New Record for Ecuador

**Authors:** Darío Cruz, Juan Pablo Suárez, Andres Chamba, Paola Duque-Sarango, Luisa Espinosa, Roo Vandregrift

PMC · DOI: 10.3390/jof12030211 · 2026-03-15

## TL;DR

This study identifies ten Xylaria species in Ecuador, including a new one, using morphology and DNA analysis, highlighting the region's fungal diversity.

## Contribution

The study introduces Xylaria aenea as a new record for Ecuador and provides preliminary DNA barcoding data for understudied Xylaria species.

## Key findings

- Ten Xylaria species were identified, including Xylaria aenea as a new record for Ecuador.
- Phylogenetic analysis revealed partial incongruence between morphological and genetic data, indicating evolutionary complexity.
- Four additional phylotypes in anamorphic states suggest higher local diversity than previously documented.

## Abstract

The genus Xylaria comprises numerous species, particularly prevalent in tropical ecosystems such as those of Ecuador. Despite its ecological importance, the taxonomy of the genus remains challenging, and much of its diversity in the Neotropics remains under-documented. This study provides a preliminary characterization of the Xylaria diversity at the Estación Científica San Francisco, an Andean biodiversity hotspot in Southern Ecuador. Through an integrated approach including detailed macro- and micro-morphological descriptions and nuclear ribosomal DNA (nrDNA ITS and LSU) phylogenetic analyses, 20 Xylaria specimens were examined. As a result, ten species were recognized: Xylaria adscendens, X. cf. anisopleura, X. apiculata, X. curta, X. enterogena, X. fissilis, X. globosa, X. aff. telfairii, X. tuberoides, and X. aenea, the latter representing a new record for Ecuador. The phylogenetic analysis presented here serves as a preliminary systematic positioning of these specimens within the genus rather than a comprehensive global reconstruction. While these ribosomal markers provided preliminary insights into species relationships, partial incongruence with morphospecies highlights the evolutionary complexity of certain lineages and underscores the need for future multilocus studies. Furthermore, four additional phylotypes found in their anamorphic state are documented, suggesting that local diversity exceeds current records. By providing detailed morphological documentation supported by preliminary barcode data from a poorly sampled region, this study contributes vital information to the global understanding of Xylaria and underscores the importance of Southern Ecuador as a reservoir of fungal diversity.

## Linked entities

- **Genes:** sycp2 (synaptonemal complex protein 2) [NCBI Gene 557000], LSU (large subunit ribosomal RNA) [NCBI Gene 800554]
- **Species:** Xylaria adscendens (taxon 665660), Xylaria apiculata (taxon 114809), Xylaria curta (taxon 42375), Xylaria enterogena (taxon 477508), Xylaria fissilis (taxon 743258), Xylaria globosa (taxon 323541), Xylaria aff. telfairii (taxon 2108241), Xylaria tuberoides (taxon 498173)

## Full-text entities

- **Diseases:** amyloid (MESH:C000718787), dry ascoma (MESH:D015352), injury to (MESH:D014947)
- **Chemicals:** Methyl blue (MESH:C414357), water (MESH:D014867), NaCl (MESH:D012965), PEG (MESH:C000595216), cellulose (MESH:D002482), KOH (MESH:C029943), ethanol (MESH:D000431), oil (MESH:D009821), Phloxine (MESH:C085059), lignin (MESH:D008031), agarose (MESH:D012685), 1X (-)
- **Species:** Xylaria plebeja (species) [taxon 743283], Xylaria sp. (species) [taxon 1715255], Xylaria enterogena (species) [taxon 477508], Xylaria feejeensis (species) [taxon 498163], Xylaria globosa (species) [taxon 323541], Xylaria longissima (species) [taxon 1720205], Xylaria anisopleura (species) [taxon 498156], Xylaria cuneata (species) [taxon 1636083], Homo sapiens (human, species) [taxon 9606], Alternaria sp. FF (species) [taxon 1749320], Xylaria arbuscula (species) [taxon 114810], Sordariomycetes (class) [taxon 147550], Xylaria curta (species) [taxon 42375], Xylaria venosula (species) [taxon 419776], Xylaria fissilis (species) [taxon 743258], Tulasnella (genus) [taxon 5240], Anisopleura (genus) [taxon 638496], Xylaria tuberoides (species) [taxon 498173], Xylaria polymorpha (dead man's fingers, species) [taxon 77046], Xylaria frustulosa (species) [taxon 743259], Xylaria corniformis (species) [taxon 2164106], Xylaria adscendens (species) [taxon 665660], Taxus globosa (Mexican yew, species) [taxon 156271], Xylaria apiculata (species) [taxon 114809], Xylaria scruposa (species) [taxon 743287], Xylaria montagnei (species) [taxon 743279], Xylaria schweinitzii (species) [taxon 364010], Xylaria hypoxylon (candlesnuff fungus, species) [taxon 37992], Xylaria telfairii (species) [taxon 477509], Xylaria bulbosa (species) [taxon 2972641], Xylaria bambusicola (species) [taxon 326684]
- **Mutations:** E13415E
- **Cell lines:** )-1437 — Homo sapiens (Human), Finite cell line (CVCL_DP66)

## Figures

11 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13027920/full.md

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Source: https://tomesphere.com/paper/PMC13027920