# Physiological and Metabolic Mechanisms of Penicillium sclerotigenum-Induced Postharvest Rot in Lichuan Yam (Dioscorea polystachya Turcz.)

**Authors:** Xiaoxiao Sun, Zhichao Wang, Yun Huang, Liya Zhang, Yuchang Zhu, Dazhai Zhou, Kun Xiong, Yan Qin, Kelin Li

PMC · DOI: 10.3390/jof12030225 · 2026-03-19

## TL;DR

This study identifies how the fungus Penicillium sclerotigenum causes rot in Lichuan yams by disrupting water and nutrient balance and altering metabolic pathways.

## Contribution

The study reveals the physiological and metabolic mechanisms by which Penicillium sclerotigenum induces postharvest rot in Lichuan yams.

## Key findings

- Penicillium sclerotigenum disrupts water-retaining structures, increasing weight loss and reducing water activity in yams.
- The infection alters carbon-nitrogen metabolism, affecting starch, sugar, and protein levels in the host.
- Metabolomics showed changes in sugars, organic acids, and secondary metabolites, with enriched sugar and amino acid pathways.

## Abstract

Postharvest decay results in substantial losses during yam storage. This study isolated microorganisms from decayed Lichuan yams and investigated deterioration mechanisms using physiological assays and UPLC-MS/MS. Among six isolates, Penicillium sclerotigenum was identified as the primary pathogen. Infection disrupted water-retaining structures, leading to increased weight loss and reduced water activity. It also disrupted carbon-nitrogen metabolism, leading to fluctuations in starch, sugar, and protein content. Although host defense responses were activated via phenolic accumulation and the upregulation of peroxidase (POD) and polyphenol oxidase (PPO) activities, sustained infection resulted in severe membrane lipid peroxidation. Metabolomics revealed alterations in sugars, organic acids, and secondary metabolites, with the specific enrichment of sugar and amino acid pathways. Thus, P. sclerotigenum remodels yam energy metabolism and defense responses. This study clarifies the physiological and metabolic mechanisms underlying this fungal rot, providing a theoretical foundation for the development of preventive control strategies.

## Linked entities

- **Proteins:** peroxidase (peroxidase PPOD1-like)
- **Species:** Penicillium sclerotigenum (taxon 69787)

## Full-text entities

- **Diseases:** necrosis (MESH:D009336), P. sclerotigenum infection (MESH:D016720), gray (MESH:D055652), skin damage (MESH:D012871), green mold disease (OMIM:614156), Penicillium disease (MESH:C000656865), P. sclerotigenum (MESH:D002972), injury to (MESH:D014947), microbial infection (MESH:D015163), dry rot (MESH:D005535), Infection (MESH:D007239), Fungal diseases (MESH:D009181), DEMs (MESH:D001039), Weight Loss (MESH:D015431)
- **Chemicals:** guaiacol (MESH:D006139), alkaloids (MESH:D000470), cellulose (MESH:D002482), coumarins (MESH:D003374), thiobarbituric acid (MESH:C029684), flavonoids (MESH:D005419), xylitol (MESH:D014993), polyphenol (MESH:D059808), perchloric acid (MESH:C576518), quinones (MESH:D011809), carbohydrate (MESH:D002241), sorbitol (MESH:D013012), Water (MESH:D014867), amino sugar (MESH:D000606), TCA (MESH:D014238), Coomassie Brilliant Blue G-250 (MESH:C004692), Sugars (MESH:D000073893), L-Tyrosine (MESH:D014443), D-mannose (MESH:D008358), galactitol (MESH:D004376), galactose (MESH:D005690), Nitrogen (MESH:D009584), glucose (MESH:D005947), saline (MESH:D012965), lipid (MESH:D008055), nucleotide (MESH:D009711), Starch (MESH:D013213), sulfuric acid (MESH:C033158), polysaccharides (MESH:D011134), sodium hypochlorite (MESH:D012973), BPM (MESH:C064753), tryptophan (MESH:D014364), Formic acid (MESH:C030544), Acetonitrile (MESH:C032159), Globotriose (MESH:C113460), sugar alcohol (MESH:D013402), O-Phospho-L-tyrosine (MESH:C000591550), 5-hydroxyferulic acid (MESH:C071744), succinic acid (MESH:D019802), -hydroxyferulic acid (-), membrane lipid (MESH:D008563), KOD (MESH:C119341), 4'-cinnamoylmussatioside (MESH:C064379), Lecanoric acid (MESH:C008263), reactive oxygen species (MESH:D017382), gallic acid (MESH:D005707), benzene (MESH:D001554), phenolic acids (MESH:C017616), phosphate (MESH:D010710), glycolipid (MESH:D006017), phenylalanine (MESH:D010649), lignans (MESH:D017705), tricarboxylic acid (MESH:D014233), Carbon (MESH:D002244), 1-Hydroxy-2-naphthoic acid (MESH:C050175), ethanol (MESH:D000431), MDA (MESH:D008315), terpenoids (MESH:D013729), Cellotriose (MESH:C000630674), amino acid (MESH:D000596)
- **Species:** Alternaria sect. Alternaria (section) [taxon 2499237], Dioscorea alata (greater yam, species) [taxon 55571], Pleosporales sp. (species) [taxon 1755443], Homo sapiens (human, species) [taxon 9606], Penicillium sclerotigenum (species) [taxon 69787], Malus domestica (apple, species) [taxon 3750], Cladosporium hillianum (species) [taxon 887094], Methylobacterium sp. SY-2 (species) [taxon 127911], Botrytis cinerea (gray fruit mold, species) [taxon 40559], Paenibacillus peoriae (species) [taxon 59893], Fungi (kingdom) [taxon 4751], P. polonicum [taxon 261831], Micromonospora sp. SY1 (species) [taxon 654938], Penicillium solitum (species) [taxon 60172], Dioscorea polystachya (Chinese yam, species) [taxon 55575], Fusarium sambucinum (species) [taxon 5128], Priestia megaterium (species) [taxon 1404], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Aspergillus (genus) [taxon 5052], Solanum tuberosum (potatoes, species) [taxon 4113], Penicillium albocoremium (species) [taxon 74831]

## Figures

8 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13027820/full.md

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Source: https://tomesphere.com/paper/PMC13027820