# Rapid Discovery of Antifungal α-Pyrone Analogs from Diaporthe kyushuensis ZMU-48-1 via an HSQC-Based DeepSAT Strategy

**Authors:** Siwen Yuan, Jiaqi Zheng, Yueling Wu, Xijing Wang, Haiwen Wang, Min Yan, Tianpeng Yin

PMC · DOI: 10.3390/jof12030161 · 2026-02-25

## TL;DR

Scientists used a new method to discover antifungal compounds from a fungus, finding eight new chemicals with potential for controlling plant diseases.

## Contribution

A novel HSQC-based DeepSAT strategy enabled rapid isolation of antifungal α-pyrone analogs from a fungal endophyte.

## Key findings

- Thirteen pyranone-type polyketides were isolated, including eight new analogs with antifungal activity.
- Compounds 4, 6, and 8 showed inhibition of specific plant pathogens at low concentrations.
- The study expands the known chemical diversity of the genus Diaporthe.

## Abstract

Endophytic fungi represent an extensive source of chemically diverse and bioactive polyketides. Herein, an HSQC-based DeepSAT-guided strategy was employed for the scaffold-prioritized isolation of metabolites from Diaporthe kyushuensis ZMU-48-1, an endophyte isolated from Acacia confusa. DeepSAT analysis of the semi-purified fractions identified an α-pyrone chemotype, which facilitated the targeted isolation of thirteen pyranone-type polyketides, including eight previously undescribed analogues, diaporthopyranone A–H (1–8). The structures of the new compounds were rigorously elucidated via comprehensive spectroscopic analysis (1D and 2D NMR and HRESIMS), while their absolute configurations were established by comparing experimental and TDDFT-calculated ECD data. All isolates (1–13) were screened for antifungal activity against nine plant pathogens. While most metabolites were inactive at 200 μg/mL, compound 4 inhibited Alternaria alternata and Valsa mali (MICs = 100 and 80 μg/mL, respectively), and compounds 6 and 8 exhibited selective inhibition against Colletotrichum musae (MICs = 60 and 80 μg/mL). These results expand the pyranone repertoire of the genus Diaporthe and underscore the utility of the HSQC–DeepSAT platform for the streamlined discovery of specific natural product scaffolds.

## Linked entities

- **Chemicals:** α-pyrone (PubChem CID 7968)
- **Species:** Diaporthe kyushuensis (taxon 104668), Acacia confusa (taxon 3809)

## Full-text entities

- **Diseases:** Fungal diseases of (MESH:D009181), injury to (MESH:D014947), cytotoxic (MESH:D064420)
- **Chemicals:** methanol (MESH:D000432), C (MESH:D002244), 3H (MESH:D014316), oil (MESH:D009821), Carbendazim (MESH:C006698), EtOH (MESH:D000431), CH2Cl2 (MESH:D008752), DMSO (MESH:D004121), vanillin (MESH:C100058), ethyl acetate (MESH:C007650), 8S (MESH:C039415), pyrone (MESH:D011753), 13C (MESH:C000615229), C10H10O4 (MESH:C004999), polyketide (MESH:D061065), CH3CN (MESH:C032159), H (MESH:D006859), methylene (MESH:C030011), Na (MESH:D012964), carboxylic acids (MESH:D002264), NaBr (MESH:C027938), Brownish yellow oil (-), formic ether (MESH:C510888), methyl butyrate (MESH:C043811), water (MESH:D014867), silica (MESH:D012822), isopropanol (MESH:D019840), 2H (MESH:D003903), KBr (MESH:C039004), butyrolactone (MESH:D015107), nitrogen (MESH:D009584), NaCl (MESH:D012965), D5 (MESH:C114768), silica gel (MESH:D058428), sodium hypochlorite (MESH:D012973), sulfuric acid (MESH:C033158), malonyl-CoA (MESH:D008316), alcohols (MESH:D000438), acetyl-CoA (MESH:D000105), S (MESH:D013455), n-hexanoic acid (MESH:C037652), PE (MESH:C004544), lactone (MESH:D007783)
- **Species:** Bipolaris sorokiniana (species) [taxon 45130], V. mali [taxon 105487], Colletotrichum musae (species) [taxon 5464], Trichoderma (genus) [taxon 5543], Fusarium graminearum (species) [taxon 5518], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Colletotrichum gloeosporioides (species) [taxon 474922], Fusarium oxysporum (species) [taxon 5507], C. musae [taxon 166643], Alternaria alternata (species) [taxon 5599], Homo sapiens (human, species) [taxon 9606], Pestalotiopsis (genus) [taxon 37840], Acacia confusa (species) [taxon 3809], Botryosphaeria dothidea (species) [taxon 55169], Diaporthe kyushuensis (species) [taxon 104668], Diaporthe (genus) [taxon 36922]
- **Cell lines:** ZMU-48-1 — Pan troglodytes (Chimpanzee), Transformed cell line (CVCL_B0T6)

## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13027769/full.md

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Source: https://tomesphere.com/paper/PMC13027769