# In Vitro Modeling of Mycelium Biomass Growth Kinetics of the Novel Fungicolous Species Xylaria karsticola NBIMCC 9097, with Insights into Its Antimicrobial Potential

**Authors:** Galena Angelova, Zlatka Ganeva, Bogdan Goranov, Nikoleta Kaneva, Mariya Brazkova, Petya Stefanova, Denica Blazheva

PMC · DOI: 10.3390/jof12030177 · 2026-03-01

## TL;DR

A rare fungus called Xylaria karsticola was studied for its growth and ability to fight microbes, showing promising antimicrobial properties.

## Contribution

This study provides the first in vitro growth modeling and antimicrobial evaluation of the novel fungicolous species Xylaria karsticola.

## Key findings

- Optimized media increased biomass yields to 20.11 and 23.25 g/dm³ in MCM and MYB media, respectively.
- Hexane and ethyl acetate extracts showed strong antimicrobial activity against Pseudomonas aeruginosa and several yeast species.
- Water biomass extract exhibited the lowest MIC of 0.02 mg/cm³ against Saccharomycodes ludwigii.

## Abstract

Xylaria karsticola NBIMCC 9097 is a recently described and rare fungicolous species originating from Bulgaria. Understanding its growth behavior and bioactive potential is essential for evaluating its biotechnological and pharmaceutical relevance. In the presented study, we model the in vitro growth kinetics of X. karsticola mycelium under submerged cultivation and assess its antimicrobial activity. Optimization of MCM and MYB media markedly increased biomass yields to 20.11 and 23.25 g/dm3, respectively, compared with non-optimized media (9.9 ± 0.21 and 10.8 ± 0.28 g/dm3). The maximum specific growth rate was higher in the MCM (0.803 ± 0.004 h−1) in comparison with the MYB medium (0.711 ± 0.003 h−1); however, the MYB medium supported greater biomass accumulation and more efficient substrate utilization, reflected by a higher utilization coefficient (0.9900 ± 0.001 versus 0.9644 ± 0.005). The antimicrobial activity was evaluated using agar disk diffusion and minimum inhibitory concentration assays against Gram-positive and Gram-negative bacteria and yeasts. Hexane and ethyl acetate extracts were most effective against Pseudomonas aeruginosa ATCC 9027 (MIC 0.067 and 0.059 mg/cm3), while notable anti-yeast activity was observed, particularly against Wickerhamomyces anomalus, Saccharomycodes ludwigii, and Pichia membranifaciens. The lowest MIC (0.02 mg/cm3) was recorded for the water biomass extract against S. ludwigii indicating potent antimicrobial activity against the tested microorganism. These findings identify X. karsticola as a potential source of antimicrobial metabolites and provide a strong motivation for comprehensive metabolomic profiling and systematic optimization of its cultivation.

## Linked entities

- **Chemicals:** hexane (PubChem CID 8058), ethyl acetate (PubChem CID 8857)
- **Species:** Xylaria karsticola (taxon 2307125), Wickerhamomyces anomalus (taxon 4927), Saccharomycodes ludwigii (taxon 36035), Pichia membranifaciens (taxon 4926)

## Full-text entities

- **Diseases:** cytotoxic (MESH:D064420), inflammatory (MESH:D007249), MCM (MESH:D009145), psoriasis (MESH:D011565), injury to (MESH:D014947)
- **Chemicals:** cellobiose (MESH:D002475), lactones (MESH:D007783), arabinose (MESH:D001089), saccharose (MESH:D013395), Maltose (MESH:D008320), raffinose (MESH:D011887), cellulose (MESH:D002482), agar (MESH:D000362), Hexane (MESH:D006586), Glucose (MESH:D005947), nitrogen (MESH:D009584), water (MESH:D014867), disaccharide (MESH:D004187), butanol (MESH:D000440), sugars (MESH:D000073893), K2HPO4 (MESH:C013216), Mueller-Hinton broth (-), PTFE (MESH:D011138), griseofulvin (MESH:D006118), 19, 20-Epoxy-cytochalasin Q (MESH:C488245), phthalides (MESH:C082022), cytochalasins (MESH:D003572), xanthones (MESH:D044004), fructose (MESH:D005632), ethyl acetate (MESH:C007650), Polyketides (MESH:D061065), Carbon (MESH:D002244), methanol (MESH:D000432), salt (MESH:D012492), methylene chloride (MESH:D008752), Terpenoids (MESH:D013729), DMSO (MESH:D004121), ethanol (MESH:D000431)
- **Species:** Escherichia coli (E. coli, species) [taxon 562], Xylaria longipes (species) [taxon 114818], Klebsiella pneumoniae (species) [taxon 573], Xylaria arbuscula (species) [taxon 114810], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Xylaria curta (species) [taxon 42375], Xylaria striata (species) [taxon 743301], Homo sapiens (human, species) [taxon 9606], Listeria monocytogenes (species) [taxon 1639], Xylaria nigripes (species) [taxon 490159], Xylaria venustula (species) [taxon 743302], Pichia membranifaciens (species) [taxon 4926], Salmonella enterica (species) [taxon 28901], Xylaria papulis (species) [taxon 498171], Agaricus bisporus (common mushroom, species) [taxon 5341], S. ludwigii [taxon 100301], Salmonella enterica subsp. enterica (subspecies) [taxon 59201], Fungi (kingdom) [taxon 4751], Xylaria karsticola (species) [taxon 2307125], Xylaria sp. (species) [taxon 1715255], Candida albicans (species) [taxon 5476], Wickerhamomyces anomalus (species) [taxon 4927], Bacillus cereus (species) [taxon 1396], Xylaria primorskensis (species) [taxon 679532], Saccharomycodes ludwigii (species) [taxon 36035], Xylaria hypoxylon (candlesnuff fungus, species) [taxon 37992], Pseudomonas aeruginosa (species) [taxon 287], Candida [taxon 1535326], Macrolepiota procera (parasol mushroom, species) [taxon 56183], Glycine max (soybean, species) [taxon 3847], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Rhodotorula mucilaginosa (species) [taxon 5537], Bacillus (genus) [taxon 55087]

## Figures

50 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13027531/full.md

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Source: https://tomesphere.com/paper/PMC13027531