# Development and Assessment of Heavy Oil-Degrading Fungal Consortia (Aspergillus and Alternaria) for Soil Bioremediation

**Authors:** Shujuan Peng, Junhao Zhu, Weiguo Liu, Junhui Zhang

PMC · DOI: 10.3390/jof12030224 · 2026-03-19

## TL;DR

Researchers developed a fungal consortium that efficiently degrades heavy oil in soil, offering a promising solution for environmental cleanup.

## Contribution

The study identifies a fungal consortium with high heavy oil degradation efficiency and provides molecular insights into its mechanisms.

## Key findings

- The F13 consortium achieved 72.0% heavy oil removal in 30 days, outperforming other consortia and single strains.
- The F13 consortium degraded long-chain alkanes (C24–C28) at a rate of 95.9%.
- Genome analysis revealed key genes like CYP505 and ALDH involved in heavy oil degradation.

## Abstract

Leveraging fungal consortia to degrade heavy oil is an emerging strategy for mitigating/cleaning up environmental pollution. However, many consortia are predominantly evaluated by measuring the biodegradation efficiency of heavy oil, with insufficient attention paid to the mechanistic underpinnings and metabolic pathways. In this study, heavy oil-degrading fungal consortia were developed for potential application in soil bioremediation. Whole-genome sequencing was used to predict the metabolic pathways and interspecific interactions driving heavy oil biodegradation. Three heavy oil-degrading fungal strains, designated Aspergillus corrugatus FH2, Aspergillus terreus FL4, and Alternaria alstroemeriae FW1, were isolated from oil sludge in the Karamay Oilfield in Xinjiang, China. Four consortia were constructed through the combination of two or three strains. The consortium F13 (FH2 + FW1) achieved 72.0% removal of heavy oil in a simulated bioremediation test over 30 days, which was more efficient than other consortia and single strains (59.5–68.5%). Notably, the mean degradation rate of long-chain alkanes (C24–C28) by F13 reached 95.9%. After F13 treatment, the major fractions of heavy oil showed considerable degradation, 87.4% for saturates, 92.0% for aromatics, 69.5% for resins, and 27.3% for asphaltenes. Genome annotation of FH2, FL4, and FW1 revealed the presence of core genes for degradation of n-alkanes and aromatics, e.g., CYP505, frmA, fadB, hmgA, ALDH, and ACSL. These functional genes encoded cross-lineage enzymes, enabling synergistic catabolism of C13–C28 alkanes and aromatics. Our findings indicated that the fungal consortium of A. corrugatus FH2 and Al. alstroemeriae FW1 has remarkable bioremediation potential for heavy oil-contaminated sites. This study provides molecular evidence for the design of targeted interventions to improve soil remediation efficiency with fungal consortia.

## Linked entities

- **Genes:** CYP505 (Bifunctional cytochrome P450/NADPH--P450 reductase) [NCBI Gene 41986414], frma (fra mauro) [NCBI Gene 31464], fadB (fatty oxidation protein FadB) [NCBI Gene 885799], HMGA (high mobility group A) [NCBI Gene 838055], Aldh (Aldehyde dehydrogenase) [NCBI Gene 34256], Acsl (Acyl-CoA synthetase long-chain) [NCBI Gene 46068]
- **Chemicals:** resins (PubChem CID 6850749)

## Full-text entities

- **Diseases:** Fungal (MESH:D009181), injury to (MESH:D014947), toxicity (MESH:D064420)
- **Chemicals:** fructose (MESH:D005632), acetaldehyde (MESH:D000079), amino acid (MESH:D000596), alkane (MESH:D000473), asphaltene (MESH:C000592077), decane (MESH:C012867), aliphatic acid (MESH:D005227), Oil (MESH:D009821), carbon (MESH:D002244), TCA (MESH:D014233), oxygen (MESH:D010100), H2O2 (MESH:D006861), benzo(a)pyrene (MESH:D001564), agarose (MESH:D012685), Heavy oil (-), aldehyde (MESH:D000447), n-heptadecane (MESH:C016486), methyl-cyclohexane (MESH:C521475), butanedioic acid (MESH:D019802), carboxylic acid (MESH:D002264), epoxide (MESH:D004852), propyl-benzene (MESH:C024268), phenanthrene (MESH:C031181), agar (MESH:D000362), nitrogen (MESH:D009584), urea (MESH:D014508), Glucose (MESH:D005947), NaCl (MESH:D012965), lipid (MESH:D008055), starch (MESH:D013213), resins (MESH:D012116), polysaccharides (MESH:D011134), hydrocarbon (MESH:D006838), diol (MESH:D011276), C15 (MESH:C003946), ketones (MESH:D007659), dihydrodiol (MESH:C507866), H2O (MESH:D014867), Al (MESH:D000535), sugars (MESH:D000073893), tetracosane (MESH:C514857), dodecane (MESH:C007548), F12 (MESH:C007782), catechol (MESH:C034221), Monosaccharides (MESH:D009005), PAH (MESH:D011084), Tween-80 (MESH:D011136), cyclic hydrocarbons (MESH:D006844), Carbohydrate (MESH:D002241), cycloalkanes (MESH:D003516), CO2 (MESH:D002245), pyrene (MESH:C030984), alcohols (MESH:D000438), pyruvate (MESH:D019289), Su (MESH:D013395), acetyl-CoA (MESH:D000105)
- **Species:** Metaphire sieboldi (earthworm, species) [taxon 506672], Solanum tuberosum (potatoes, species) [taxon 4113], Brevibacillus sp. (species) [taxon 1882945], Fusarium proliferatum (species) [taxon 948311], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Lysinibacillus fusiformis (species) [taxon 28031], Aspergillus (genus) [taxon 5052], Trametes maxima (species) [taxon 259368], Ganoderma lucidum (species) [taxon 5315], Cunninghamella (genus) [taxon 4852], Aspergillus terreus (species) [taxon 33178], Purpureocillium lilacinum (species) [taxon 33203], Rhizopus (genus) [taxon 4842], Trichoderma (genus) [taxon 5543], Pseudomonas putida (species) [taxon 303], Aspergillus sp. (species) [taxon 5065], Rossellomorea marisflavi (species) [taxon 189381], Mucor (genus) [taxon 4830], Acinetobacter sp. (species) [taxon 472], Alternaria sp. (species) [taxon 1715220], Stenotrophomonas maltophilia (species) [taxon 40324], Penicillium sp. (species) [taxon 5081], Penicillium janthinellum (species) [taxon 5079], Brucella intermedia (species) [taxon 94625], Fungi (kingdom) [taxon 4751], Bacillus cereus (species) [taxon 1396], Aspergillus sydowii (species) [taxon 75750], Saccharomyces cerevisiae (baker's yeast, species) [taxon 4932], Alternaria sect. Alternaria (section) [taxon 2499237], Bacillus sp. (in: firmicutes) (species) [taxon 1409], Ectopseudomonas mendocina (species) [taxon 300], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** DL-1 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z231)

## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13027517/full.md

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Source: https://tomesphere.com/paper/PMC13027517