# Multi-Protein Profiling Reveals High Nuclear KFL-4 Expression as a Predictor of Poor Overall Survival in Breast Cancer: A Retrospective Cohort Study

**Authors:** Mariz Kasoha, Bashar Haj Hamoud, Rainer M. Bohle, Barbara Linxweiler, Raphaela Bosch, Gilbert Georg Klamminger, Gilda Schmidt, Erich-Franz Solomayer, Meletios P. Nigdelis

PMC · DOI: 10.3390/ijms27062576 · International Journal of Molecular Sciences · 2026-03-11

## TL;DR

This study finds that high nuclear KLF-4 expression in breast cancer is linked to worse survival, suggesting it could help predict outcomes and guide treatment.

## Contribution

Nuclear KLF-4 is identified as a novel independent adverse prognostic marker in breast cancer.

## Key findings

- High nuclear KLF-4 expression is independently associated with poor overall survival in breast cancer patients.
- High cytoplasmic E-cadherin expression correlates with improved overall survival.
- High ERβ1 expression shows a marginal protective effect against metastasis.

## Abstract

Following the establishment of the four molecular subtypes of breast cancer, additional biomarkers are required to further refine prognostication and patient stratification. Krüppel-like factors (KLFs), components of Wnt signaling, estrogen receptor beta (ERβ) isoforms, cyclin D1, and E-cadherin have been implicated in epithelial–mesenchymal transition, tumor proliferation, and disease progression. In this monocentric retrospective cohort study, tissue microarrays from 153 patients with histologically confirmed breast cancer were analyzed by immunohistochemistry to assess the expression of cytoplasmic Dkk1, β-catenin, and E-cadherin, as well as nuclear cyclin D1, KLF-4, KLF-5, and ERβ isoforms, using the Remmele and Stegner immunoreactive score. Associations between protein expression patterns with clinicopathological characteristics and survival outcomes using univariable and multivariable Cox regression analyses were examined. High cytoplasmic E-cadherin expression was associated with improved overall survival [hazard ratio (HR) 0.37, 95% confidence interval (95% CI) 0.18–0.77, p = 0.008], whereas high nuclear expression of KLF-4 (HR 2.63, 95% CI 1.32–5.22, p = 0.006) and KLF-5 (HR 2.16, 95% CI 1.01–4.65, p = 0.048) was associated with reduced overall survival. High ERβ1 expression showed a marginally protective association with the development of metastases (log-rank test p = 0.045). Importantly, nuclear KLF-4 expression remained independently associated with adverse overall survival after adjustment for tumor stage, lymph node status, molecular subtype, and other molecular markers (adjusted HR 4.09, 95% CI 1.93–8.67, p < 0.001). These findings identify nuclear KLF-4 as an adverse prognostic marker in breast cancer and support its potential relevance for molecular patient stratification.

## Linked entities

- **Genes:** KLF4 (KLF transcription factor 4) [NCBI Gene 9314], KLF5 (KLF transcription factor 5) [NCBI Gene 688], ESR2 (estrogen receptor 2) [NCBI Gene 2100], DKK1 (dickkopf Wnt signaling pathway inhibitor 1) [NCBI Gene 22943], ctnnb1.S (catenin beta 1 S homeolog) [NCBI Gene 380441], shg (shotgun) [NCBI Gene 37386], ccnd1.S (cyclin D1 S homeolog) [NCBI Gene 379161]
- **Proteins:** KLF4 (KLF transcription factor 4), KLF5 (KLF transcription factor 5), ESR2 (estrogen receptor 2), DKK1 (dickkopf Wnt signaling pathway inhibitor 1), ctnnb1.S (catenin beta 1 S homeolog), shg (shotgun), ccnd1.S (cyclin D1 S homeolog)
- **Diseases:** breast cancer (MONDO:0004989)

## Full-text entities

- **Genes:** KLF5 (KLF transcription factor 5) [NCBI Gene 688] {aka BTEB2, CKLF, IKLF}, ESR2 (estrogen receptor 2) [NCBI Gene 2100] {aka ER-BETA, ESR-BETA, ESRB, ESTRB, Erb, NR3A2}, KLF4 (KLF transcription factor 4) [NCBI Gene 9314] {aka EZF, GKLF}, DKK1 (dickkopf Wnt signaling pathway inhibitor 1) [NCBI Gene 22943] {aka DKK-1, SK}, CDH1 (cadherin 1) [NCBI Gene 999] {aka Arc-1, BCDS1, CD324, CDHE, ECAD, LCAM}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, CCND1 (cyclin D1) [NCBI Gene 595] {aka BCL1, D11S287E, PRAD1, U21B31}
- **Diseases:** metastases (MESH:D009362), tumor (MESH:D009369), Breast Cancer (MESH:D001943)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13026467/full.md

## References

56 references — full list in the complete paper: https://tomesphere.com/paper/PMC13026467/full.md

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Source: https://tomesphere.com/paper/PMC13026467