# Identification of Candidate Gene Controlling Soluble Sugar Degradation During Postharvest Storage of Sweet Corn Based on BSA-Seq

## TL;DR

This study identifies a candidate gene that may control sugar degradation in sweet corn during storage, helping improve its shelf life and flavor.

## Contribution

The discovery of a candidate gene linked to soluble sugar degradation in sweet corn using BSA-Seq.

## Key findings

- Three chromosomal regions associated with sugar degradation were identified.
- A candidate gene, Zm00001eb069070, was highlighted as potentially regulating sugar degradation.
- The gene is highly expressed in kernels with a longer shelf life.

## Abstract

Background/Objectives: Sweetness is a key determinant of the eating quality of sweet corn, primarily governed by the soluble sugar content in kernels. The soluble sugar content decreases rapidly during the postharvest shelf life, which directly affects the flavor and quality. Relatively few studies have been conducted on the shelf life of sweet corn. Methods: An F6 recombinant inbred line (RIL) population was constructed from two super sweet inbred lines with contrasting soluble sugar degradation rates: D174 (low degradation rate) and D179 (high degradation rate). Extreme phenotype pools were established using soluble sugar content as the target trait. Based on bulked segregant analysis sequencing, we identified chromosomal segments associated with postharvest soluble sugar reduction in sweet corn, annotated the gene information within these segments, and analyzed the functions of the annotated genes using the Gene Ontology and Genomes databases. Results: Results revealed three associated regions located at 44,205,775–45,290,843 bp on chromosome 4, 6,250,656–6,744,665 bp on chromosome 2, and 135,428,709–136,732,132 bp on chromosome 10. This interval contained 195 genes. Integrated analysis of gene expression, gene annotations, and quantitative real-time PCR indicated that Zm00001eb069070, which is highly expressed in kernels with a prolonged shelf life, might be a key candidate gene regulating soluble sugar degradation in sweet corn. Conclusions: This study provides valuable genetic resources for the improvement of favorable agronomic traits and the advancement of molecular breeding strategies for sweet corn.