# Triptonide Suppresses AML via PI3K/AKT Signaling: A Network Pharmacology Approach Validated by Molecular Docking and Experimental Studies

**Authors:** Lixia Song, Jing Meng, Huijie Li, Wanxin Fu, Kun Hong, Shengnan Shen, Zheping Zhang, Shilan Ding, Shengpeng Li, Zifan Zhang, Weijian Bei, Hairu Huo, Yuqing Tan, Feng Sui, Li Liu

PMC · DOI: 10.3390/cimb48030239 · 2026-02-24

## TL;DR

Triptonide, a natural compound, shows promise in treating AML by inhibiting the PI3K/AKT pathway, supported by computational and experimental evidence.

## Contribution

This study identifies the PI3K/AKT pathway as a key target of triptonide in AML using network pharmacology and experimental validation.

## Key findings

- Triptonide binds strongly to AKT1 and PIK3R1, key components of the PI3K/AKT pathway.
- In vitro and in vivo experiments confirm triptonide's anti-AML effects via PI3K/AKT inhibition.
- Triptonide suppresses AML cell proliferation and induces apoptosis without organ toxicity.

## Abstract

Triptonide (TN), a natural bioactive compound derived from Tripterygium wilfordii with multiple antitumor activities, has a poorly defined exact mechanism in acute myeloid leukemia (AML)—a hematologic malignancy with limited treatment options. This study systematically clarifies TN’s mechanisms in AML through an integrative strategy combining network pharmacology, molecular docking, molecular dynamics simulation, and in vitro/in vivo experiment validation. Predicted TN targets using Swiss Target Prediction and PharmMapper, and AML-associated genes via GeneCards, OMIM, and CTD. Verall, O198 overlapping targets were mapped to build a PPI network using STRING and Cytoscape. Identified hub gene (AKT1, EGFR, HSP90AA1, HSP90AB1, and PIK3R1) using CytoNCA, MCODE, and CytoHubba algorithms. GO and KEGG enrichment analyses highlighted marked enrichment in the PI3K/AKT pathway. TN exhibited high affinity binding to AKT1 (−7.28 kcal/mol) and PIK3R1 (−7.33 kcal/mol), with stable interactions confirmed by molecular dynamics simulations. The GSEA of the DEGs from GEPIA 2 revealed prominent activation of the PI3K/AKT signaling pathway, indicating its key role as a regulator of AML pathogenesis. In vitro, TN dose-dependently suppressed proliferation of multiple AML cell lines induced apoptosis, and downregulated the expression of P-PI3K and P-AKT. The AKT activator SC79 reversed TN-induced suppression in AML cells, validating PI3K/AKT pathway dependency. In vivo, TN significantly inhibited tumor growth in xenograft models without causing organ toxicity in female nude mice. These findings reveal the therapeutic potential of TN against AML through inhibiting the PI3K/AKT axis. With no PI3K/AKT inhibitors targeting AML approved as first-line therapies, TN emerges as a promising candidate for AML treatment, offering a safer natural alternative.

## Linked entities

- **Genes:** AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207], EGFR (epidermal growth factor receptor) [NCBI Gene 1956], HSP90AA1 (heat shock protein 90 alpha family class A member 1) [NCBI Gene 3320], HSP90AB1 (heat shock protein 90 alpha family class B member 1) [NCBI Gene 3326], PIK3R1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 5295], Akt (Akt kinase) [NCBI Gene 41957]
- **Chemicals:** Triptonide (PubChem CID 65411), SC79 (PubChem CID 2810830)
- **Diseases:** acute myeloid leukemia (MONDO:0015667), AML (MONDO:0018874)
- **Species:** Mus musculus (taxon 10090)

## Full-text entities

- **Genes:** Mki67 (antigen identified by monoclonal antibody Ki 67) [NCBI Gene 17345] {aka D630048A14Rik, Ki-67, Ki67}, PIK3R1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 5295] {aka AGM7, GRB1, IMD36, p85, p85-ALPHA, p85alpha}, GLI2 (GLI family zinc finger 2) [NCBI Gene 2736] {aka CJS, HPE9, PHS2, THP1, THP2}, Akt1 (Akt serine/threonine kinase 1) [NCBI Gene 11651] {aka Akt, LTR-akt, PKB, PKB/Akt, PKBalpha, Rac}, CLEC3B (C-type lectin domain family 3 member B) [NCBI Gene 7123] {aka MCDR4, TN, TNA}, GAPDH (glyceraldehyde-3-phosphate dehydrogenase) [NCBI Gene 2597] {aka G3PD, GAPD, HEL-S-162eP}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, CTNNB1 (catenin beta 1) [NCBI Gene 1499] {aka CTNNB, EVR7, MRD19, NEDSDV, armadillo}, FLT3 (fms related receptor tyrosine kinase 3) [NCBI Gene 2322] {aka CD135, FLK-2, FLK2, STK1}, NOTCH1 (notch receptor 1) [NCBI Gene 4851] {aka AOS5, AOVD1, TAN1, hN1}, POTEF (POTE ankyrin domain family member F) [NCBI Gene 728378] {aka A26C1B, POTE2alpha, POTEACTIN}, CDKN2A (cyclin dependent kinase inhibitor 2A) [NCBI Gene 1029] {aka ARF, CAI2, CDK4I, CDKN2, CMM2, INK4}, Hsp90ab1 (heat shock protein 90 alpha (cytosolic), class B member 1) [NCBI Gene 15516] {aka 90kDa, Hsp84, Hsp84-1, Hsp90, Hspcb}, BCL2 (BCL2 apoptosis regulator) [NCBI Gene 596] {aka Bcl-2, PPP1R50}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, H3P16 (H3 histone pseudogene 16) [NCBI Gene 644914] {aka H3.6, H3F3AP6, p21}, Clec3b (C-type lectin domain family 3, member b) [NCBI Gene 21922] {aka Tna}, CASP3 (caspase 3) [NCBI Gene 836] {aka CPP32, CPP32B, SCA-1}, Pik3r1 (phosphoinositide-3-kinase regulatory subunit 1) [NCBI Gene 18708] {aka PI3K, p50alpha, p55alpha, p85alpha}, PTK2B (protein tyrosine kinase 2 beta) [NCBI Gene 2185] {aka CADTK, CAKB, FADK2, FAK2, PKB, PTK}, TP53 (tumor protein p53) [NCBI Gene 7157] {aka BCC7, BMFS5, LFS1, P53, TRP53}, Hsp90aa1 (heat shock protein 90, alpha (cytosolic), class A member 1) [NCBI Gene 15519] {aka 86kDa, 89kDa, Hsp86-1, Hsp89, Hsp90, Hspca}, Egfr (epidermal growth factor receptor) [NCBI Gene 13649] {aka 9030024J15Rik, Erbb, Errb1, Errp, Wa5, wa-2}, ANXA5 (annexin A5) [NCBI Gene 308] {aka ANX5, CPB-I, ENX2, HEL-S-7, PP4, RPRGL3}
- **Diseases:** Tumor (MESH:D009369), lung, ovarian, pancreatic, and leukemia (MESH:D010051), adult acute leukemia (MESH:D054198), inflammatory (MESH:D007249), hematologic malignancies (MESH:D019337), solid (MESH:D018250), lymphoma (MESH:D008223), Prostate cancer (MESH:D011471), metastasis (MESH:D009362), AML (MESH:D015470), Leukemia (MESH:D007938), tumorigenesis (MESH:D063646), lung cancer (MESH:D008175), infection (MESH:D007239), injury to (MESH:D014947), colorectal cancer (MESH:D015179), atherosclerosis (MESH:D050197), pancreatic cancer (MESH:D010190), toxicity (MESH:D064420), MF (MESH:C567116), HCC (MESH:D006528), gastric cancer (MESH:D013274)
- **Chemicals:** H&amp;E (MESH:D006371), DMSO (MESH:D004121), PI (MESH:D010716), PBS (MESH:D007854), diterpenoid (MESH:D004224), 7-AAD (MESH:C025942), paraffin (MESH:D010232), Water (MESH:D014867), venetoclax (MESH:C579720), cytarabine (MESH:D003561), hematoxylin (MESH:D006416), CO2 (MESH:D002245), ethanol (MESH:D000431), Triton X-100 (MESH:D017830), azacitidine (MESH:D001374), TN (MESH:C084079), Hydrogen (MESH:D006859), PVDF (MESH:C024865), anthracycline (MESH:D018943), GLN457 (-), Lipid (MESH:D008055), SDS (MESH:D012967), CCK-8 (MESH:D012844), DAB (MESH:C000469)
- **Species:** Tripterygium wilfordii (species) [taxon 458696], Mus musculus (house mouse, species) [taxon 10090], Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** H — Rattus norvegicus (Rat), Adenocarcinoma of the rat prostate, Cancer cell line (CVCL_Y658), HL60 — Homo sapiens (Human), Adult acute myeloid leukemia with maturation, Cancer cell line (CVCL_0002), NB4 — Homo sapiens (Human), Acute promyelocytic leukemia with PML-RARA, Cancer cell line (CVCL_0005), S2 — Drosophila melanogaster (Fruit fly), Spontaneously immortalized cell line (CVCL_Z232), MV4-11 — Homo sapiens (Human), Childhood acute monocytic leukemia, Cancer cell line (CVCL_0064), U937 — Homo sapiens (Human), Adult acute monocytic leukemia, Cancer cell line (CVCL_0007), MOLM-13 — Homo sapiens (Human), Adult acute monocytic leukemia, Cancer cell line (CVCL_2119)

## Figures

9 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13025876/full.md

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Source: https://tomesphere.com/paper/PMC13025876