# ABT Promotes Adventitious Root Formation in Mulberry Cuttings by Coordinating Hormonal Homeostasis and Defense Priming

**Authors:** Zhen Qin, Tiantian Wang, Ziyi Song, Hao Dou, Chaobing Luo, Xiu Zhang, Huijuan Sun, Bingyang Zhang, Yaru Hou, Shihao Sun, Chenbo Tan, Jin’e Quan, Zhaojun Liu

PMC · DOI: 10.3390/cimb48030299 · 2026-03-11

## TL;DR

ABT improves rooting in mulberry cuttings by balancing hormones and preparing for defense, offering insights for better propagation in forest trees.

## Contribution

The study reveals how ABT enhances rooting by coordinating hormonal balance and defense priming in mulberry cuttings.

## Key findings

- ABT upregulates GH3 and modulates ERF1/2 to balance auxin and ethylene signaling during rooting.
- ABT reduces cell-wall rigidity and activates EXPA11 to promote root primordium emergence.
- PR-1 and WRKY/RPM1 suggest ABT primes defense responses while supporting root elongation.

## Abstract

Mulberry (Morus alba) is an economically important forest tree species, yet cutting propagation is constrained by low adventitious rooting efficiency. Although ABT, a composite rooting promoter, can improve cutting survival, its molecular basis remains unclear. Here, cuttings of the cultivar Qiangsang 1 were treated with ABT, NAA, or IAA (200–1000 mg/L) and subjected to transcriptome profiling to elucidate how ABT enhances rooting. Hormone-related analyses showed that ABT upregulated GH3 (auxin-amido synthetase) at days 0 and 20, implicating auxin homeostasis. ERF1/2 (ethylene response factors) exhibited a temporal oscillation, with induction at day 10 followed by repression from days 20 to 30, consistent with a shift from developmental programs to defense-related processes. In parallel, JAZ (jasmonate ZIM-domain) genes were downregulated at day 0 and subsequently upregulated; together with CYP94C1, these changes may attenuate jasmonate-associated defense signaling. For cell remodeling and defense coordination, ABT reduced the expression of genes associated with cell-wall rigidity while inducing EXPA11 (expansin) at day 20, potentially facilitating root primordium emergence. Meanwhile, PR-1 (pathogenesis-related protein 1) was transiently upregulated at days 0, 20, and 30, and the concomitant modulation of WRKY transcription factors and RPM1 suggests enhanced defense readiness. Integrative network analysis further indicated that a GH3–ERF1/2–PR-1 module links hormonal and defense cues and may activate BAT1 (energy metabolism) and RBOHB (ROS production) to support adventitious root elongation. Collectively, these results suggest that ABT improves rooting efficiency by reshaping hormonal homeostasis and coordinating cell-wall reconstruction with a pre-activated defense state, thereby providing a conceptual framework for balancing root induction and defense responses during vegetative propagation in forest trees.

## Linked entities

- **Genes:** GH3 (glycoside hydrolase) [NCBI Gene 30183616], ZFP36L1 (ZFP36 like 1 zinc finger CCCH-type) [NCBI Gene 677], ZFP36L2 (ZFP36 like 2 zinc finger CCCH-type) [NCBI Gene 678], ZNF346 (zinc finger protein 346) [NCBI Gene 23567], CYP94C1 (cytochrome P450, family 94, subfamily C, polypeptide 1) [NCBI Gene 817315], EXPA11 (expansin 11) [NCBI Gene 838608], TMEM37 (transmembrane protein 37) [NCBI Gene 140738], WRKY (probable WRKY transcription factor 33) [NCBI Gene 103865671], rpm-1 (E3 ubiquitin-protein ligase rpm-1) [NCBI Gene 179259], DDX39B (DExD-box helicase 39B) [NCBI Gene 7919], RBOHB (respiratory burst oxidase-like protein) [NCBI Gene 837430]
- **Chemicals:** NAA (PubChem CID 6862), IAA (PubChem CID 802)
- **Species:** Morus alba (taxon 3498)

## Full-text entities

- **Genes:** RBOHB (respiratory burst oxidase-like protein) [NCBI Gene 837430] {aka ATRBOHB, ATRBOHB-BETA, F7G19.4, F7G19_4, respiratory burst oxidase homolog B}, RIPK (Protein kinase superfamily protein) [NCBI Gene 815147] {aka RPM1-induced protein kinase, T6P5.14, T6P5_14}, CYP94C1 (cytochrome P450, family 94, subfamily C, polypeptide 1) [NCBI Gene 817315] {aka ''cytochrome P450, F15K20.21, F15K20_21, cytochrome P450, family 94, polypeptide 1}, HAK5 (high affinity K+ transporter 5) [NCBI Gene 826973] {aka ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, ATHAK5, T9E8.160, T9E8_160, high affinity K+ transporter 5}, TMEM37 (transmembrane protein 37) [NCBI Gene 140738] {aka PR, PR1}, EP3 (homolog of carrot EP3-3 chitinase) [NCBI Gene 824608] {aka ATCHITIV, ATEP3, CHITINASE CLASS IV, CHIV, T14E10.4, homolog of carrot EP3-3 chitinase}, ACL (acetone-cyanohydrin lyase) [NCBI Gene 816892] {aka ACETONE-CYANOHYDRIN LYASE, ARABIDOPSIS METHYL ESTERASE 8, ARABIDOPSIS THALIANA METHYL ESTERASE 2, ATME8, ATMES2, F26B6.25}, TIR1 (F-box/RNI-like superfamily protein) [NCBI Gene 825473] {aka AtTIR1, TRANSPORT INHIBITOR RESPONSE 1}, SLC7A9 (solute carrier family 7 member 9) [NCBI Gene 11136] {aka BAT1, CSNU3}, ACT12 (actin-12) [NCBI Gene 823805] {aka ACTIN, actin-12}, AP2 [NCBI Gene 103445097], SWEET12 (bidirectional sugar transporter SWEET12-like protein) [NCBI Gene 832431] {aka AtSWEET12, MQM1.8, MQM1_8, MTN3, homolog of Medicago truncatula MTN3}, WAT1 (Walls Are Thin 1) [NCBI Gene 843886] {aka F1B16.19, UMAMIT5, Usually multiple acids move in and out Transporters 5, Walls Are Thin 1}, NPR1 (regulatory protein (NPR1)) [NCBI Gene 842733] {aka ARABIDOPSIS NONEXPRESSER OF PR GENES 1, ATNPR1, F15H21.6, F15H21_6, NIM1, NON-INDUCIBLE IMMUNITY 1}, MYC2 (Basic helix-loop-helix (bHLH) DNA-binding family protein) [NCBI Gene 840158] {aka ATMYC2, F6N18.4, F6N18_4, JAI1, JASMONATE INSENSITIVE 1, JIN1}, PR1 (pathogenesis-related protein 1) [NCBI Gene 815949] {aka ATPR1, PATHOGENESIS-RELATED GENE 1, PATHOGENESIS-RELATED PROTEIN 1, PR 1, T6B13.15, T6B13_15}, RPM1 (NB-ARC domain-containing disease resistance protein) [NCBI Gene 819889] {aka DISEASE RESISTANCE PROTEIN RPM1, RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, RESISTANCE TO PSEUDOMONAS SYRINGAE 3, RPS3}, RPS2 (NB-ARC domain-containing disease resistance protein) [NCBI Gene 828715] {aka DISEASE RESISTANCE PROTEIN RPS2, F20B18.200, F20B18_200, RESISTANT TO P. SYRINGAE 2}, AUX1 (Transmembrane amino acid transporter family protein) [NCBI Gene 818390] {aka AUXIN RESISTANT 1, AtAUX1, F16M14.5, F16M14_5, MAP1, MODIFIER OF ARF7/NPH4 PHENOTYPES 1}, WRKY12 (WRKY family transcription factor) [NCBI Gene 819083] {aka AtWRKY12, WRKY DNA-binding protein 12}, BAT1 (bidirectional amino acid transporter 1) [NCBI Gene 814645] {aka AtGABP, GABA permease, GABP, bidirectional amino acid transporter 1}, ERF1-2 (eukaryotic release factor 1-2) [NCBI Gene 837850] {aka F13K23.17, F13K23_17, eukaryotic release factor 1-2}, EXPA11 (expansin 11) [NCBI Gene 838608] {aka ATEXP11, ATEXPA11, ATHEXP ALPHA 1.14, EXP11, EXPANSIN  11, EXPANSIN 11}
- **Diseases:** toxicity (MESH:D064420), injury to (MESH:D014947), AR (MESH:D011843), CML (MESH:D015464)
- **Chemicals:** TRIzol (MESH:C411644), cytokinin (MESH:D003583), 6-benzyladenine (MESH:C480551), IBA (MESH:C014612), NAA (MESH:D009280), ABT (MESH:C002502), auxin (MESH:D007210), carbendazim (MESH:C006698), JA (MESH:C011006), Ethylene (MESH:C036216), GA (MESH:D005708), ABT-1 (-), ABA (MESH:D000040), IAA (MESH:C030737), water (MESH:D014867), nitrogen (MESH:D009584), BR (MESH:D060406), amino acids (MESH:D000596), ZT (MESH:D015026), SA (MESH:D020156), Gibberellins (MESH:D005875), ROS (MESH:D017382)
- **Species:** Homo sapiens (human, species) [taxon 9606], Arabidopsis thaliana (mouse-ear cress, species) [taxon 3702], Morus alba (white mulberry, species) [taxon 3498], Oryza sativa (Asian cultivated rice, species) [taxon 4530], Morus notabilis (species) [taxon 981085], Malus domestica (apple, species) [taxon 3750]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13025735/full.md

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Source: https://tomesphere.com/paper/PMC13025735