# Mitochondrial Quality Control and Metabolic Reprogramming in Hepatocellular Carcinoma: Implications for Immunotherapy and Treatment Resistance

**Authors:** Yusra Zarlashat, Anna Picca

PMC · DOI: 10.3390/cells15060517 · 2026-03-13

## TL;DR

This paper explores how mitochondrial dysfunction in liver cancer affects immune responses and treatment resistance, suggesting new strategies to improve immunotherapy.

## Contribution

The paper integrates mitochondrial metabolism and immune escape mechanisms to propose novel combination therapies for HCC.

## Key findings

- Mitochondrial dysfunction in HCC supports tumor survival and immune evasion.
- Metabolic reprogramming in HCC reduces T-cell function and promotes exhaustion.
- Targeting mitochondrial pathways may enhance immunotherapy responses in HCC.

## Abstract

Hepatocellular carcinoma (HCC) is a leading cause of cancer death, characterized by poor prognosis in advanced stages despite available therapies. Dysfunctional mitochondrial can initiate both tumor progression and antitumor immunity. Altered mitochondrial quality control mechanisms, including dynamics, biogenesis, and degradation, contribute to mitochondrial decline supporting hepatocarcinogenesis and tumor survival. Within the immunosuppressive tumor microenvironment, HCC cells shift their metabolism toward glycolysis, which reduces nutrient availability and triggers mitochondrial dysfunction in infiltrating immune cells, leading to T-cell exhaustion and weakened cytotoxic activity. Herein, we discuss how immune checkpoint inhibitors may respond to this exhaustion. While most findings showing that these therapies partially restore mitochondrial bioenergetics in T cells have been conducted in preclinical studies, direct clinical evidence in HCC patients remains limited. By combining current knowledge on mitochondrial metabolism, immune escape, and treatment resistance, we discuss how targeting mitochondrial pathways may help improve immunotherapy responses and support new combination treatment approaches against HCC.

## Linked entities

- **Diseases:** Hepatocellular carcinoma (MONDO:0007256), HCC (MONDO:0007256)

## Full-text entities

- **Genes:** BSG (basigin (Ok blood group)) [NCBI Gene 682] {aka 5F7, CD147, EMMPRIN, EMPRIN, HAb18G, OK}, FABP5 (fatty acid binding protein 5) [NCBI Gene 2171] {aka E-FABP, EFABP, KFABP, PA-FABP, PAFABP}, CTLA4 (cytotoxic T-lymphocyte associated protein 4) [NCBI Gene 397286], PIK3R1 [NCBI Gene 100286865], CTLA4 (cytotoxic T-lymphocyte associated protein 4) [NCBI Gene 1493] {aka ALPS5, CD, CD152, CELIAC3, CTLA-4, GRD4}, CSF1 (colony stimulating factor 1) [NCBI Gene 1435] {aka CSF-1, MCSF, PG-M-CSF}, SRSF10 (serine and arginine rich splicing factor 10) [NCBI Gene 100625186], PRKAB1 (protein kinase AMP-activated non-catalytic subunit beta 1) [NCBI Gene 5564] {aka AMPK, HAMPKb}, Ephb1 (Eph receptor B1) [NCBI Gene 24338] {aka Ephb2, Erk, elk}, GLUT1 [NCBI Gene 397404], GZMB (granzyme B) [NCBI Gene 3002] {aka C11, CCPI, CGL-1, CGL1, CSP-B, CSPB}, VEGFA (vascular endothelial growth factor A) [NCBI Gene 7422] {aka L-VEGF, MVCD1, VEGF, VPF}, CGAS (cyclic GMP-AMP synthase) [NCBI Gene 115004] {aka C6orf150, D4, MB21D1, h-cGAS}, Mtfr2 (mitochondrial fission regulator 2) [NCBI Gene 71804] {aka 2610016C23Rik, 4933412C16Rik, Dufd1, Fam54a}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, PIK3CB (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta) [NCBI Gene 5291] {aka P110BETA, PI3K, PI3KBETA, PIK3C1}, CCL2 (C-C motif chemokine ligand 2) [NCBI Gene 6347] {aka GDCF-2, HC11, HSMCR30, MCAF, MCP-1, MCP1}, PTK2 (protein tyrosine kinase 2) [NCBI Gene 5747] {aka FADK, FADK 1, FAK, FAK1, FRNK, PPP1R71}, MIR34A (microRNA 34a) [NCBI Gene 407040] {aka MIRN34A, miRNA34A, mir-34, mir-34a}, Mtor (mechanistic target of rapamycin kinase) [NCBI Gene 56718] {aka Frap1, RAFT1}, ARG1 (arginase 1) [NCBI Gene 383], IL10 (interleukin 10) [NCBI Gene 3586] {aka CSIF, GVHDS, IL-10, IL10A, TGIF}, PPARGC1A (PPARG coactivator 1 alpha) [NCBI Gene 10891] {aka LEM6, PGC-1(alpha), PGC-1alpha, PGC-1v, PGC1, PGC1A}, SREBF1 (sterol regulatory element binding transcription factor 1) [NCBI Gene 6720] {aka HMD, IFAP2, SREBP1, bHLHd1}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 100126861] {aka Akt, PKB}, TCF7 (transcription factor 7) [NCBI Gene 6932] {aka TCF-1}, MYB (MYB proto-oncogene, transcription factor) [NCBI Gene 100152439], TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, CD274 (CD274 molecule) [NCBI Gene 574058] {aka PDL1}, Nrf1 (nuclear respiratory factor 1) [NCBI Gene 18181] {aka D6Ertd415e}, CYCS (cytochrome c, somatic) [NCBI Gene 54205] {aka CYC, HCS, THC4}, Tfam (transcription factor A, mitochondrial) [NCBI Gene 21780] {aka Hmgts, mtTFA, tsHMG}, Vegfa (vascular endothelial growth factor A) [NCBI Gene 83785] {aka VEGF-A, VEGF111, VEGF164, VPF, Vegf}, CD47 (CD47 molecule) [NCBI Gene 397042] {aka CD47/IAP}, CAMK2G (calcium/calmodulin dependent protein kinase II gamma) [NCBI Gene 818] {aka CAMK, CAMK-II, CAMKG, MRD59}, Akt1 (AKT serine/threonine kinase 1) [NCBI Gene 24185] {aka Akt}, MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, MAP2K7 (mitogen-activated protein kinase kinase 7) [NCBI Gene 5609] {aka JNKK2, MAPKK7, MEK, MEK 7, MKK7, PRKMK7}, OPA1 (OPA1 mitochondrial dynamin like GTPase) [NCBI Gene 4976] {aka BERHS, MGM1, MTDPS14, MTDPS14A, MTDPS14B, NPG}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 100127359] {aka FRAP1}, FOXP3 (forkhead box P3) [NCBI Gene 50943] {aka AIID, DIETER, IPEX, JM2, PIDX, XPID}, MTOR (mechanistic target of rapamycin kinase) [NCBI Gene 2475] {aka FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS}, NFE2L2 (NFE2 like bZIP transcription factor 2) [NCBI Gene 4780] {aka IMDDHH, NRF2, Nrf-2}, KDR (kinase insert domain receptor) [NCBI Gene 3791] {aka CD309, FLK1, VEGFR, VEGFR2}, SLC16A1 (solute carrier family 16 member 1) [NCBI Gene 6566] {aka HHF7, MCT, MCT1, MCT1D}, SIRPA (signal regulatory protein alpha) [NCBI Gene 494566] {aka CD172, PTPNS1, swc3}, MIR221 (microRNA 221) [NCBI Gene 407006] {aka MIRN221, miRNA221, mir-221}, PRKN (parkin RBR E3 ubiquitin protein ligase) [NCBI Gene 5071] {aka AR-JP, LPRS2, PARK2, PDJ}, MIR21 (microRNA 21) [NCBI Gene 406991] {aka MIRN21, hsa-mir-21, miR-21, miRNA21}, RHBDD1 (rhomboid domain containing 1) [NCBI Gene 100512869], IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}, CPT1A (carnitine palmitoyltransferase 1A) [NCBI Gene 1374] {aka CPT I, CPT1, CPT1-L, CPTI-L, L-CPT1}, TGFB1 (transforming growth factor beta 1) [NCBI Gene 7040] {aka CAEND1, CED, DPD1, IBDIMDE, LAP, TGF-beta1}, HIF1A (hypoxia inducible factor 1 subunit alpha) [NCBI Gene 3091] {aka HIF-1-alpha, HIF-1A, HIF-1alpha, HIF1, HIF1-ALPHA, MOP1}, MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594] {aka ERK, ERK-2, ERK2, ERT1, MAPK2, NS13}, PTK2B (protein tyrosine kinase 2 beta) [NCBI Gene 2185] {aka CADTK, CAKB, FADK2, FAK2, PKB, PTK}, IL15 (interleukin 15) [NCBI Gene 3600] {aka IL-15}, LDHA (lactate dehydrogenase A) [NCBI Gene 3939] {aka GSD11, HEL-S-133P, LDHM, PIG19}, PDGFRB (platelet derived growth factor receptor beta) [NCBI Gene 5159] {aka CD140B, IBGC4, IMF1, JTK12, KOGS, OPDKD}, PPARGC1A (PPARG coactivator 1 alpha) [NCBI Gene 397013] {aka PGC1, PGC1A, PPARGC-1, PPARGC1}
- **Diseases:** TAM (MESH:D020914), hypoglycemia (MESH:D007003), mitochondrial defects (MESH:C565376), MASH (MESH:D005234), inflammation (MESH:D007249), MASLD (MESH:D008107), hypoxic (MESH:D002534), liver (MESH:D017093), hypoxia (MESH:D000860), cirrhosis (MESH:D005355), Tumor (MESH:D009369), Viral Hepatitis (MESH:D014777), metabolic diseases (MESH:D008659), melanoma (MESH:D008545), hepatic damage (MESH:D056486), nutrient deficiency (MESH:D007153), fibrosarcoma (MESH:D005354), Mitochondrial (MESH:D028361), cytotoxic (MESH:D064420), gut dysbiosis (MESH:D064806), MQC (MESH:D007174), HCC (MESH:D006528), liver tumors (MESH:D008113), metastasis (MESH:D009362), non-alcoholic steatohepatitis (MESH:D005235), death (MESH:D003643), carcinogenesis (MESH:D063646), mitochondrial dysregulation (MESH:D021081), injury to (MESH:D014947), CHB (MESH:D006509), infection (MESH:D007239), NETs (MESH:C536657)
- **Chemicals:** short-chain fatty acids (MESH:D005232), glucose (MESH:D005947), Pembrolizumab (MESH:C582435), tigecycline (MESH:D000078304), sorafenib (MESH:D000077157), chloroquine (MESH:D002738), ATP (MESH:D000255), Atezolizumab (MESH:C000594389), Bevacizumab (MESH:D000068258), bile acids (MESH:D001647), bafilomycin A1 (MESH:C040929), ROS (MESH:D017382), 5-aminoimidazole-4-carboxamide ribonucleotide (MESH:C031143), Triglyceride (MESH:D014280), aflatoxin (MESH:D000348), lipid (MESH:D008055), pentose phosphate (MESH:D010428), Nivolumab (MESH:D000077594), cisplatin (MESH:D002945), doxorubicin (MESH:D004317), alcohol (MESH:D000438), etomoxir (MESH:C054207), iron (MESH:D007501), TCA (MESH:D014233), fatty acid (MESH:D005227), Lactate (MESH:D019344), regorafenib (MESH:C559147), oxygen (MESH:D010100), glutamine (MESH:D005973), linoleic acid (MESH:D019787), 4-1BB (-)
- **Species:** hepatitis C virus [taxon 11103], Hepatitis B virus (no rank) [taxon 10407], Bifidobacterium (genus) [taxon 1678], Homo sapiens (human, species) [taxon 9606], Mus musculus (house mouse, species) [taxon 10090]
- **Cell lines:** B16F10 — Mus musculus (Mouse), Mouse melanoma, Cancer cell line (CVCL_0159)

## Figures

4 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13025669/full.md

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Source: https://tomesphere.com/paper/PMC13025669