# A Rare Case of De Novo Acute Myeloid Leukemia, Featuring a KMT2A (MLL) Amplification

**Authors:** Fares Hassan, Jeff Chen, Charles Westphal, Carlos A. Tirado

PMC · DOI: 10.3390/diagnostics16060820 · 2026-03-10

## TL;DR

An elderly patient with a rare form of acute myeloid leukemia showed KMT2A amplification and complex genetic changes, leading to a poor prognosis.

## Contribution

This paper reports a rare case of KMT2A amplification in AML, highlighting its association with adverse prognosis and complex cytogenetics.

## Key findings

- KMT2A (MLL) amplification was detected in 46.5% of cells, with four or more copies in 22%.
- The patient's leukemia was associated with a complex karyotype and adverse-risk molecular features.
- Clinical outcomes were poor, leading to hospice care due to rapid deterioration and high-risk profile.

## Abstract

We present a case of a patient in their 80s initially presenting with myelodysplastic syndromes (MDS). Chromosomal analysis showed an abnormal female karyotype with a complex karyotype. Metaphase FISH confirmed four copies of KMT2A (MLL) in 24.5% [49/200] and amplification of KMT2A (MLL) with more than four copies in 22% [44/200]. FISH also revealed the presence of MYC (8q24) on the long arm of chromosome 2 at 2q33 locus, two copies of BCR on each homolog 22, and two additional copies of BCR on a derivative chromosome 22. Flow cytometric analysis revealed a population of aberrant myeloid blasts (15–17%). Bone marrow analysis showed hypercellular marrow with a significant increase in myeloid blasts (~50%) and trilineage dysplasia. Eventually, these findings were consistent with a final diagnosis of acute myeloid leukemia non-M3 and a complex karyotype, correlating with cytogenetics, flow cytometry, molecular, and clinical findings. The patient’s clinical course was marked by a rapid deterioration, including recurrent arrhythmias, hypoxic respiratory failure, and septic shock. Given their poor clinical status and adverse-risk molecular profile, care was transported to hospice. The presence of KMT2A amplification is a rare event in AML and is present in ~1% of AML and MDS cases. MYC translocation, KMT2A (MLL) amplification, and 5q/20q losses suggest secondary therapy-related AML and categorize this case in the adverse risk prognosis under the ELN 2022 guidelines.

## Linked entities

- **Genes:** KMT2A (lysine methyltransferase 2A) [NCBI Gene 4297], KMT2A (lysine methyltransferase 2A) [NCBI Gene 4297], MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609], BCR (BCR activator of RhoGEF and GTPase) [NCBI Gene 613]
- **Diseases:** myelodysplastic syndromes (MONDO:0018881), acute myeloid leukemia (MONDO:0015667)

## Full-text entities

- **Genes:** MYC (MYC proto-oncogene, bHLH transcription factor) [NCBI Gene 4609] {aka MRTL, MYCC, bHLHe39, c-Myc}, BCR (BCR activator of RhoGEF and GTPase) [NCBI Gene 613] {aka ALL, BCR1, CML, D22S11, D22S662, PHL}, KMT2A (lysine methyltransferase 2A) [NCBI Gene 4297] {aka ALL-1, ALL1, CXXC7, GAS7, HRX, HTRX}
- **Diseases:** AML (MESH:D015470), Myeloid Leukemia (MESH:D007951), septic shock (MESH:D012772), trilineage dysplasia (MESH:D015792), acute myeloid leukemia non-M3 (MESH:D015473), MDS (MESH:D009190), arrhythmias (MESH:D001145), respiratory failure (MESH:D012131), hypoxic (MESH:D002534)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Figures

2 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13025582/full.md

---
Source: https://tomesphere.com/paper/PMC13025582