# Glycolytic Enzymes Are Part of an Oncogenic Network in AML

**Authors:** Stefan Nagel, Corinna Meyer, Claudia Pommerenke

PMC · DOI: 10.3390/cells15060569 · Cells · 2026-03-23

## TL;DR

This study shows how abnormal activity of glycolytic enzymes in a leukemia cell line contributes to cancer growth and suggests new treatment strategies.

## Contribution

The study identifies a novel oncogenic network involving glycolytic enzymes and glucose metabolism in AML.

## Key findings

- Aberrant PFKL overexpression lowers glucose levels in AML cells.
- Reduced glucose activates IRF6 and developmental genes in OCI-M2 cells.
- PFKL and GPI are linked to an oncogenic network involving IRF6 and NKX2-4.

## Abstract

What are the main findings?
Aberrant PFKL overexpression reduces the intra-cellular glucose level in AML cell line OCI-M2.The reduced glucose level activates developmental gene activities including IRF6 and its downstream targets.

Aberrant PFKL overexpression reduces the intra-cellular glucose level in AML cell line OCI-M2.

The reduced glucose level activates developmental gene activities including IRF6 and its downstream targets.

What is the implication of the main finding?
Cell line OCI-M2 may serve as an in vitro model to establish glycolysis-targeted therapies in AML.

Cell line OCI-M2 may serve as an in vitro model to establish glycolysis-targeted therapies in AML.

Erythroid acute myeloid leukemia (AML) cell line OCI-M2 expresses a particular oncogenic network: IRF6, in concert with ETV2 and HEY1, aberrantly activates NKL homeobox gene NKX2-4, which in turn represses megakaryocytic lineage factor FLI1. Interestingly, in keratinocytes, IRF6 is able to bind glucose which promotes IRF6-dimerization and thus alters its binding site selection. Here, we used OCI-M2 as a model to investigate the role of glucose level and IRF6 in leukemogenesis. Treatment of OCI-M2 with high glucose or 2-deoxy-glucose resulted in the downregulation of IRF6 and NKX2-4, and the upregulation of FLI1, indicating that glucose-mediated dimerization of IRF6 altered its reported autoactivation. The screening of this cell line for genes encoding glycolytic enzymes identified aberrant overexpression of glucose-6-phosphate isomerase (GPI) and phosphofructokinase L (PFKL), which were targeted by genomic amplification and chromothripsis-like alterations, respectively. Furthermore, GPI was activated by NKX2-4 and ETV2, and PFKL by ETV2. Finally, siRNA-mediated downregulation of PFKL resulted in elevated glucose levels, suppressed expression of IRF6 and NKX2-4, and activated FLI1. Thus, we connected an oncogenic regulatory network with deregulated glycolytic enzymes and glucose metabolism, thereby establishing a new in vitro model to develop novel therapeutic avenues in AML subsets.

## Linked entities

- **Genes:** PFKL (phosphofructokinase, liver type) [NCBI Gene 5211], IRF6 (interferon regulatory factor 6) [NCBI Gene 3664], NKX2-4 (NK2 homeobox 4) [NCBI Gene 644524], FLI1 (Fli-1 proto-oncogene, ETS transcription factor) [NCBI Gene 2313], ETV2 (ETS variant transcription factor 2) [NCBI Gene 2116], HEY1 (hes related family bHLH transcription factor with YRPW motif 1) [NCBI Gene 23462], GPI (glucose-6-phosphate isomerase) [NCBI Gene 2821]
- **Chemicals:** glucose (PubChem CID 5793), 2-deoxy-glucose (PubChem CID 108223)
- **Diseases:** AML (MONDO:0018874), acute myeloid leukemia (MONDO:0015667)

## Full-text entities

- **Genes:** IRX1 (iroquois homeobox 1) [NCBI Gene 79192] {aka IRX-5, IRXA1}, HES1 (hes family bHLH transcription factor 1) [NCBI Gene 3280] {aka HES-1, HHL, HRY, bHLHb39}, DYRK1A (dual specificity tyrosine phosphorylation regulated kinase 1A) [NCBI Gene 1859] {aka DYRK, DYRK1, HP86, MNB, MNBH, MRD7}, PIGC (phosphatidylinositol glycan anchor biosynthesis class C) [NCBI Gene 5279] {aka GPI2, GPIBD16, MRT62}, NOTCH3 (notch receptor 3) [NCBI Gene 4854] {aka CADASIL, CADASIL1, CARASIL1, CASIL, FPLD1, IMF2}, PIGQ (phosphatidylinositol glycan anchor biosynthesis class Q) [NCBI Gene 9091] {aka DEE77, EIEE77, GPI1, GPIBD19, MCAHS4, c407A10.1}, FLI1 (Fli-1 proto-oncogene, ETS transcription factor) [NCBI Gene 2313] {aka BDPLT21, EWSR2, FLI-1, SIC-1}, ETV2 (ETS variant transcription factor 2) [NCBI Gene 2116] {aka ER71, ETSRP71}, ENO1 (enolase 1) [NCBI Gene 2023] {aka ENO1-IT1, ENO1L1, HEL-S-17, MPB1, NNE, PPH}, TAL1 (TAL bHLH transcription factor 1, erythroid differentiation factor) [NCBI Gene 6886] {aka SCL, TCL5, bHLHa17, tal-1}, GLIS2 (GLIS family zinc finger 2) [NCBI Gene 84662] {aka NKL, NPHP7}, SLC2A1 (solute carrier family 2 member 1) [NCBI Gene 6513] {aka CSE, DYT17, DYT18, DYT9, EIG12, GLUT}, NKX2-3 (NK2 homeobox 3) [NCBI Gene 159296] {aka CSX3, NK2.3, NKX2.3, NKX2C, NKX4-3}, FBP2 (fructose-bisphosphatase 2) [NCBI Gene 8789] {aka CORLK}, KDM1A (lysine demethylase 1A) [NCBI Gene 23028] {aka AIMAH3, AOF2, BHC110, CPRF, KDM1, LSD1}, HEY1 (hes related family bHLH transcription factor with YRPW motif 1) [NCBI Gene 23462] {aka BHLHb31, CHF2, HERP2, HESR1, HRT-1, NERP2}, NOTCH1 (notch receptor 1) [NCBI Gene 4851] {aka AOS5, AOVD1, TAN1, hN1}, GPI (glucose-6-phosphate isomerase) [NCBI Gene 2821] {aka AMF, CNSHA4, GNPI, NLK, PGI, PHI}, MEF2C (myocyte enhancer factor 2C) [NCBI Gene 4208] {aka C5DELq14.3, DEL5q14.3, NEDHSIL}, PFKL (phosphofructokinase, liver type) [NCBI Gene 5211] {aka ATP-PFK, PFK-B, PFK-L}, IRF6 (interferon regulatory factor 6) [NCBI Gene 3664] {aka LPS, OFC6, PIT, PPS, PPS1, VWS}, GATA1 (GATA binding protein 1) [NCBI Gene 2623] {aka CNSHA9, ERYF1, GATA-1, GF-1, GF1, HAEADA}, PFKFB3 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3) [NCBI Gene 5209] {aka IPFK2, PFK2, iPFK-2}, PKM (pyruvate kinase M1/2) [NCBI Gene 5315] {aka CTHBP, HEL-S-30, OIP3, PK3, PKM2, TCB}, PFKFB1 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1) [NCBI Gene 5207] {aka F6PK, HL2K, PFRX}, TUBA1B (tubulin alpha 1b) [NCBI Gene 10376] {aka K-ALPHA-1}, PFKFB2 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2) [NCBI Gene 5208] {aka PFK-2/FBPase-2}, PGM1 (phosphoglucomutase 1) [NCBI Gene 5236] {aka CDG1T, GSD14}, HK2 (hexokinase 2) [NCBI Gene 3099] {aka HKII, HXK2}, TBP (TATA-box binding protein) [NCBI Gene 6908] {aka GTF2D, GTF2D1, HDL4, SCA17, TBP1, TFIID}, F3 (coagulation factor III, tissue factor) [NCBI Gene 2152] {aka CD142, TF, TFA}, TWIST1 (twist family bHLH transcription factor 1) [NCBI Gene 7291] {aka ACS3, BPES2, BPES3, CRS, CRS1, CSO}, DNMBP (dynamin binding protein) [NCBI Gene 23268] {aka ARHGEF36, CTRCT48, TUBA}, PFKFB4 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4) [NCBI Gene 5210], KLF3 (KLF transcription factor 3) [NCBI Gene 51274] {aka BKLF}, CISH (cytokine inducible SH2 containing protein) [NCBI Gene 1154] {aka BACTS2, CIS, CIS-1, G18, SOCS}, NKX2-4 (NK2 homeobox 4) [NCBI Gene 644524] {aka NKX2.4, NKX2D}
- **Diseases:** hepatocellular carcinoma (MESH:D006528), colon cancer (MESH:D015179), pancreas cancer (MESH:D010190), cleft palate (MESH:D002972), Infection (MESH:D007239), injury to (MESH:D014947), AML (MESH:D015470), leukemia (MESH:D007938), carcinogenesis (MESH:D063646), lymphoid and myeloid malignancies (MESH:D008223), myelodysplastic syndromes (MESH:D009190), hematopoietic malignancies (MESH:D019337), Hodgkin lymphoma (MESH:D006689), mycoplasma infection (MESH:D009175), genetic abnormalities (MESH:D030342), neuroblastoma (MESH:D009447), megakaryocytic or erythroid leukemia (MESH:D007947), Cancer (MESH:D009369)
- **Chemicals:** TRIzol (MESH:C411644), pentose phosphate (MESH:D010428), 2-DG (MESH:D003847), pyridine (MESH:C023666), PBS (-), lactate (MESH:D019344), fructose-6-phosphate (MESH:C027618), glucose-6-phosphate (MESH:D019298), oligonucleotides (MESH:D009841), fructose-2-6-bis-phosphate (MESH:C027652), etoposide (MESH:D005047), Sugars (MESH:D000073893), water (MESH:D014867), fructose-1,6-bisphosphate (MESH:C029063), ribitol (MESH:D012255), Glucose (MESH:D005947), nitrogen (MESH:D009584), methoxyamine hydrochloride (MESH:C005214), dichloromethane (MESH:D008752), DMSO (MESH:D004121), methanol (MESH:D000432), glycogen (MESH:D006003)
- **Species:** Homo sapiens (human, species) [taxon 9606]
- **Cell lines:** HEL — Homo sapiens (Human), Erythroleukemia, Cancer cell line (CVCL_0001), TF-1 — Homo sapiens (Human), Erythroleukemia, Cancer cell line (CVCL_3608), OCI-M2 — Homo sapiens (Human), Acute erythroid leukemia, Cancer cell line (CVCL_2150), PTO-41 — Mus musculus (Mouse), Mouse kidney carcinoma, Cancer cell line (CVCL_0151), F-36P — Homo sapiens (Human), Acute erythroid leukemia, Cancer cell line (CVCL_2037), THP-1 — Homo sapiens (Human), Childhood acute monocytic leukemia, Cancer cell line (CVCL_0006), L-1236 — Homo sapiens (Human), Hodgkin lymphoma, Cancer cell line (CVCL_2096)

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13024823/full.md

## References

50 references — full list in the complete paper: https://tomesphere.com/paper/PMC13024823/full.md

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Source: https://tomesphere.com/paper/PMC13024823