# Transcriptome Analysis and Identification of Chemosensory Genes in Leguminivora glycinivorella

**Authors:** Jiaqi Shi, Yuxin Zhou, Zhengxiao Du, Ruirui Li, Qi Wang, Yu Gao, Shusen Shi

PMC · DOI: 10.3390/biology15060505 · Biology · 2026-03-21

## TL;DR

Researchers identified genes in the soybean pod borer that help it detect chemical signals, which could lead to better pest control methods.

## Contribution

The study provides a comprehensive identification and expression analysis of chemosensory genes in Leguminivora glycinivorella.

## Key findings

- 183 candidate chemosensory genes were identified, including odorant, gustatory, and ionotropic receptors.
- Sex-specific gene expression patterns suggest roles in pheromone detection and host plant interaction.
- Absence of certain sensory gene groups may reflect adaptation to soybean feeding.

## Abstract

The soybean pod borer is a serious soybean pest because its larvae feed inside pods and damage developing seeds, making conventional insecticide control difficult. To support the development of safer and more effective management strategies, we investigated the genes that may help this insect detect chemical cues from host plants, mates, and its surroundings. By analyzing transcriptome data from multiple adult tissues, we identified 183 candidate genes related to chemical sensing. Many of these genes showed clear differences in expression among tissues and between females and males. In particular, genes associated with odor detection were mainly enriched in the antennae, the primary sensory organs for smelling. Male antennae showed high expression of several candidate genes that may be involved in pheromone detection, whereas some genes were more highly expressed in females and may contribute to host finding and egg-laying site selection. We also found that some expected sensory gene groups were absent from the dataset, which may be related to the insect’s close adaptation to soybean. These results provide a foundation for future functional studies and may help support environmentally friendly pest control based on chemical communication.

The soybean pod borer, Leguminivora glycinivorella, is a monophagous pest that threatens soybean production. Its larvae feed concealed within pods, which limits the efficacy of conventional insecticides. Elucidating its chemosensory system is therefore essential for developing green, behavior-based management strategies. Reference-based transcriptomics across multiple tissues of L. glycinivorella identified a comprehensive repertoire of chemosensory genes, including 76 odorant receptors (ORs), 15 gustatory receptors (GRs), 18 ionotropic receptors (IRs), 52 odorant-binding proteins (OBPs), 18 chemosensory proteins (CSPs), and 4 sensory neuron membrane proteins (SNMPs). Sequence and phylogenetic analyses characterized these candidates within the context of known insect chemosensory families. Notably, canonical bitter GRs and specific IR lineages (e.g., IR100/IR85a) were not detected in our dataset, potentially reflecting adaptation to the specialized soybean-feeding habit of this pest. Expression profiling further revealed pronounced sexual and tissue dimorphism: male antennae showed significant enrichment of putative pheromone receptors (PRs) and LglySNMP1, whereas several OBPs and ORs exhibited female-biased expression, suggesting roles in host location and oviposition. Additionally, the high expression of GR43a homologs points to fructose sensing, while the lack of detectable CO2 receptor components (except LglyGR2) suggests atypical carbon dioxide perception mechanisms. Collectively, this study provides a valuable expression atlas of chemosensory genes in L. glycinivorella and identifies sex-specific candidate genes for future functional validation and behavior-based pest management.

## Linked entities

- **Genes:** BCL2A1 (BCL2 related protein A1) [NCBI Gene 597], IARS1 (isoleucyl-tRNA synthetase 1) [NCBI Gene 3376], obp.S (olfactory binding protein S homeolog) [NCBI Gene 100301961], Gr43a (Gustatory receptor 43a) [NCBI Gene 35655]
- **Species:** Leguminivora glycinivorella (taxon 1035111)

## Full-text entities

- **Genes:** Actin [NCBI Gene 100811630]
- **Diseases:** FA (MESH:D005831), IR (MESH:D013734), -C (OMIM:211750), injury to (MESH:D014947), Minus-C (MESH:D003410), borer (MESH:C535769), MA (MESH:D005832), SNMP (MESH:D015433)
- **Chemicals:** D-maltose (MESH:D008320), D-sorbitol (MESH:D013012), acetic acid (MESH:D019342), TRIzol (MESH:C411644), chlorfenapyr (MESH:C436643), D-galactose (MESH:D005690), calcium (MESH:D002118), (E,E)-8,10-dodecadien-1-yl acetate (-), VOCs (MESH:D055549), lactic acid (MESH:D019344), terpenes (MESH:D013729), bicarbonate (MESH:D001639), amines (MESH:D000588), CO2 (MESH:D002245), sugar (MESH:D000073893), nitrogen (MESH:D009584), D-fructose (MESH:D005632), cysteine (MESH:D003545)
- **Species:** Homo sapiens (human, species) [taxon 9606], Tuta absoluta (species) [taxon 702717], Spodoptera frugiperda (fall armyworm, species) [taxon 7108], Plodia interpunctella (Indian meal moth, species) [taxon 58824], Bactrocera dorsalis (oriental fruit fly, species) [taxon 27457], Heliothis virescens (tobacco budworm, species) [taxon 7102], Bombyx mori (domestic silkworm, species) [taxon 7091], Papilio bianor (Chinese peacock butterfly, species) [taxon 76199], Streltzoviella insularis (species) [taxon 1206366], Drosophila melanogaster (fruit fly, species) [taxon 7227], Spodoptera litura (species) [taxon 69820], Spodoptera littoralis (African cotton leafworm, species) [taxon 7109], Grapholita molesta (oriental fruit moth, species) [taxon 192188], Antheraea yamamai (Japanese oak silkmoth, species) [taxon 7121], Glycine max (soybean, species) [taxon 3847], Danaus plexippus (American monarch, species) [taxon 13037], Lymantria dispar (gypsy moth, species) [taxon 13123], Pieris rapae (cabbage white, species) [taxon 64459], Helicoverpa assulta (species) [taxon 52344], Adoxophyes honmai (smaller tea tortrix, species) [taxon 85585], Galleria mellonella (greater wax moth, species) [taxon 7137], Mythimna separata (ear-cutting caterpillar, species) [taxon 271217], Anopheles gambiae (African malaria mosquito, species) [taxon 7165], Manduca sexta (Carolina sphinx, species) [taxon 7130], Orosius orientalis (species) [taxon 1223886], Eumeta japonica (species) [taxon 151549], Heliconius melpomene (common postman, species) [taxon 34740], Leguminivora glycinivorella (species) [taxon 1035111], Epiphyas postvittana (species) [taxon 65032], Conogethes punctiferalis (durian fruit borer, species) [taxon 1133088], Chilo suppressalis (Asiatic rice borer, species) [taxon 168631], Agrotis ipsilon (black cutworm moth, species) [taxon 56364], Bombyx mandarina (wild silkworm, species) [taxon 7092], Cydia pomonella (codling moth, species) [taxon 82600], Spodoptera exigua (beet armyworm, species) [taxon 7107], Hyphantria cunea (fall webworm moth, species) [taxon 39466], Plutella xylostella (cabbage moth, species) [taxon 51655], Helicoverpa armigera (American bollworm, species) [taxon 29058], Antheraea polyphemus (polyphemus moth, species) [taxon 7120], Holotrichia parallela (large black chafer, species) [taxon 93412], Ostrinia furnacalis (Asian corn borer, species) [taxon 93504], Helicoverpa zea (bollworm, species) [taxon 7113]

## Full text

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## Figures

12 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13024613/full.md

## References

98 references — full list in the complete paper: https://tomesphere.com/paper/PMC13024613/full.md

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Source: https://tomesphere.com/paper/PMC13024613