# Integrating Structural, Biochemical, and Cellular Perspectives on the TFIIH Helicases XPB and XPD

**Authors:** Marco Bravo, Li Fan

PMC · DOI: 10.3390/biom16030435 · Biomolecules · 2026-03-13

## TL;DR

This paper explores the roles of XPB and XPD helicases in DNA repair and transcription, highlighting their structural and functional versatility in maintaining genome integrity.

## Contribution

The paper integrates structural, biochemical, and cellular insights to clarify the regulatory mechanisms and therapeutic relevance of XPB and XPD helicases.

## Key findings

- XPB generates torsional strain to promote DNA opening during transcription and repair.
- XPD verifies lesions and extends repair bubbles through 5′ to 3′ helicase activity.
- Mutations in XPB or XPD lead to diseases like xeroderma pigmentosum and trichothiodystrophy.

## Abstract

Xeroderma pigmentosum group B (XPB/ERCC3) and group D (XPD/ERCC2) helicases are integral components of the transcription factor IIH (TFIIH) complex, coordinating DNA unwinding during transcription initiation and nucleotide excision repair (NER). XPB functions as an ATP-driven translocase that generates torsional strain to promote promoter melting and DNA opening at lesion sites, whereas XPD acts as a 5′ to 3′ helicase responsible for lesion verification and extension of the repair bubble. Structural and biochemical studies have clarified how TFIIH subunits regulate these helicases—p52 and p8 modulate XPB’s translocation activity, while p44, p62, and MAT1 control XPD’s helicase function through conformational and compositional transitions within the complex. Beyond their canonical roles, XPB and XPD participate in diverse cellular pathways, including cell-cycle regulation and oxidative stress response, highlighting their involvement in maintaining genome integrity beyond repair and transcription. Mutations in either helicase lead to xeroderma pigmentosum (XP), trichothiodystrophy (TTD), or combined XP/Cockayne syndrome (XP/CS) phenotypes, emphasizing the essential role of TFIIH integrity for human health. Recent biochemical and pharmacological advances have further revealed the therapeutic relevance of these helicases—XPB as a target of small-molecule inhibitors such as triptolide, Minnelide, and spironolactone, and XPD as a potential modulator of cancer sensitivity to DNA-damaging treatments. Collectively, XPB and XPD exemplify the structural and functional versatility of TFIIH helicases across repair, transcription, and genome maintenance.

## Linked entities

- **Genes:** ERCC3 (ERCC excision repair 3, TFIIH core complex helicase subunit) [NCBI Gene 2071], ERCC2 (ERCC excision repair 2, TFIIH core complex helicase subunit) [NCBI Gene 2068], ERCC3 (ERCC excision repair 3, TFIIH core complex helicase subunit) [NCBI Gene 2071], ERCC2 (ERCC excision repair 2, TFIIH core complex helicase subunit) [NCBI Gene 2068]
- **Proteins:** ERCC3 (ERCC excision repair 3, TFIIH core complex helicase subunit), ERCC2 (ERCC excision repair 2, TFIIH core complex helicase subunit), FKBP4 (FKBP prolyl isomerase 4), S100A8 (S100 calcium binding protein A8), GTF2H2 (general transcription factor IIH subunit 2), GTF2H1 (general transcription factor IIH subunit 1), MNAT1 (MNAT1 component of CDK activating kinase)
- **Chemicals:** triptolide (PubChem CID 107985), Minnelide (PubChem CID 46203139), spironolactone (PubChem CID 5833)
- **Diseases:** xeroderma pigmentosum (MONDO:0019600), trichothiodystrophy (MONDO:0002470), Cockayne syndrome (MONDO:0016006)

## Full-text entities

- **Genes:** ERCC3 (ERCC excision repair 3, TFIIH core complex helicase subunit) [NCBI Gene 2071] {aka BTF2, GTF2H, RAD25, Ssl2, TFIIH, TTD2}, GTF2H4 (general transcription factor IIH subunit 4) [NCBI Gene 2968] {aka P52, TFB2, TFIIH, XPJ}, MNAT1 (MNAT1 component of CDK activating kinase) [NCBI Gene 4331] {aka CAP35, MAT1, RNF66, TFB3}, HFM1 (helicase for meiosis 1) [NCBI Gene 164045] {aka MER3, POF9, SEC63D1, Si-11, Si-11-6, helicase}, ERCC2 (ERCC excision repair 2, TFIIH core complex helicase subunit) [NCBI Gene 2068] {aka COFS2, CXPD, EM9, TFIIH, TTD, TTD1}, NUP62 (nucleoporin 62) [NCBI Gene 23636] {aka IBSN, SNDI, p62}, GTF2H2 (general transcription factor IIH subunit 2) [NCBI Gene 2966] {aka BTF2, BTF2 p44, BTF2P44, T-BTF2P44, TFIIH, p44}
- **Diseases:** XP/Cockayne syndrome (MESH:C567061), TTD (MESH:D054463), XP (MESH:D014983), cancer (MESH:D009369)
- **Chemicals:** Minnelide (MESH:C579022), ATP (MESH:D000255), triptolide (MESH:C001899), spironolactone (MESH:D013148)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13024598/full.md

## References

123 references — full list in the complete paper: https://tomesphere.com/paper/PMC13024598/full.md

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Source: https://tomesphere.com/paper/PMC13024598