# Clinical Potential of Essential Oils: Cytotoxicity, Selectivity Index and Antimicrobial Activity Against Gram-Negative ESKAPEE Pathogens

**Authors:** Biruk Bayleyegn Belete, Jerome Ozkan, Parthasarathi Kalaiselvan, Muhammad Yasir, Mark Willcox

PMC · DOI: 10.3390/antibiotics15030274 · Antibiotics · 2026-03-06

## TL;DR

This review explores how certain plant essential oils can fight antibiotic-resistant bacteria and may be toxic to cancer cells but safe for normal cells.

## Contribution

The study identifies essential oils with high antimicrobial activity and selectivity indices against Gram-negative pathogens.

## Key findings

- Ocimum basilicum and Satureja nabateorum essential oils showed strong antibacterial effects with high selectivity indices.
- Some essential oils were toxic to cancer cells but not to normal mammalian cells.
- Further research is needed to validate the safety and clinical potential of these oils.

## Abstract

Background: Novel therapeutic compounds with strong efficacy and low resistance potential are urgently needed to combat life-threatening infections caused by antibiotic-resistant ESKAPEE pathogens. These pathogens contribute globally to a large share of bloodstream, respiratory, urinary, and wound infections, and often have levels of high antimicrobial resistance. This review examined the antimicrobial efficacy of different plant essential oils (EOs) against Gram-negative ESKAPEE pathogens and their cytotoxic effects and calculated selectivity indices in cancer and normal cell lines. Methods: This review was developed using studies retrieved from PubMed, Scopus, and Web of Science, covering publications between 2013 and 2024 using the search terms: “essential oils”, “plant extracts”, “safety”, “cytotoxicity”, “cell lines”, “human”, “in-vitro”, antimicrobial”, “antibacterial” and “antibiotic” with Boolean operators (“AND”, “OR”, “NOT”). Only studies that reported both antimicrobial inhibitory concentrations and concentrations causing toxicity to mammalian cells were included in the final review. These data were then used to calculate the selectivity indices of the EOs (toxic concentration/antimicrobial inhibitory concentration) to give an initial assessment of safety. Results: Ocimum basilicum EOs had strong antibacterial effects against the Gram-negative ESKAPEE pathogens Escherichia coli, Pseudomonas aeruginosa, and Klebsiella pneumoniae, with minimum inhibitory concentrations (MICs) as low as 1 μg/mL and high selectivity indices of >80.4. Likewise, Satureja nabateorum EOs had potent antibacterial activity, with a low MIC of 0.1 μg/mL against K. pneumoniae, 2.3 μg/mL against E. coli, and 12.5 μg/mL against P. aeruginosa, along with a very high selectivity index (>100). Other EOs such as those from Eucalyptus spp., Thymus spp., Mentha spp., Cinnamomum spp., Artemisia spp., and Aquilaria crassna also had broad-spectrum antibacterial potential and minimal toxicity toward mammalian cells, making them promising candidates for safe and effective antimicrobial agents in clinical and industrial applications. However, several EOs had selectivity indices of <10, indicating that at their MIC they would also be potentially highly cytotoxic. EOs tended to show increased toxicity to cells derived from cancers. Conclusions and recommendations: Certain EOs are highly active against Gram-negative ESKAPEE pathogens. They are also toxic to cancer-derived mammalian cells. Additional studies using normal cell lines and clinical trials are warranted to further validate their safety and therapeutic potential.

## Linked entities

- **Diseases:** respiratory infections (MONDO:0024355)
- **Species:** Escherichia coli (taxon 562), Pseudomonas aeruginosa (taxon 287), Klebsiella pneumoniae (taxon 573)

## Full-text entities

- **Genes:** SOD1 (superoxide dismutase 1) [NCBI Gene 6647] {aka ALS, ALS1, HEL-S-44, IPOA, SOD, STAHP}, TXN (thioredoxin) [NCBI Gene 7295] {aka TRDX, TRX, TRX1, TXN1, Trx80}, AKT1 (AKT serine/threonine kinase 1) [NCBI Gene 207] {aka AKT, PKB, PKB-ALPHA, PRKBA, RAC, RAC-ALPHA}, NFKB1 (nuclear factor kappa B subunit 1) [NCBI Gene 4790] {aka CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1}, MAPK1 (mitogen-activated protein kinase 1) [NCBI Gene 5594] {aka ERK, ERK-2, ERK2, ERT1, MAPK2, NS13}, PTK2B (protein tyrosine kinase 2 beta) [NCBI Gene 2185] {aka CADTK, CAKB, FADK2, FAK2, PKB, PTK}, STAT3 (signal transducer and activator of transcription 3) [NCBI Gene 6774] {aka ADMIO, ADMIO1, APRF, HIES}
- **Diseases:** sepsis (MESH:D018805), cancer (MESH:D009369), hemolytic (MESH:D006461), joint pain (MESH:D018771), acne (MESH:D000152), anxiety (MESH:D001007), inflammatory (MESH:D007249), scarlet fever (MESH:D012541), asthma (MESH:D001249), infectious diseases (MESH:D003141), fever (MESH:D005334), coughs (MESH:D003371), MRSA (MESH:D013203), ESKAPEE bacteria (MESH:C000719206), fungal and bacterial infections (MESH:D009181), Gram (MESH:D016908), abscesses (MESH:D000038), obesity (MESH:D009765), K. pneumonia (MESH:D011014), infections (MESH:D007239), bloodstream, respiratory, urinary, and wound infections (MESH:D012141), injury to (MESH:D014947), gastrointestinal issues (MESH:D005767), immunodeficiency syndromes (MESH:D007153), gastritis (MESH:D005756), intestinal and soft tissue infections (MESH:D018461), Pain (MESH:D010146), wound infection (MESH:D014946), Cytotoxicity (MESH:D064420), cervical carcinoma (MESH:D002583), food poisoning (MESH:D005517)
- **Chemicals:** oils (MESH:D009821), GSH (MESH:D005978), carvone (MESH:C006923), d-limonene (MESH:D000077222), pulegone (MESH:C039648), carvacrol (MESH:C073316), phosphate (MESH:D010710), cephalosporin (MESH:D002511), EO (MESH:D009822), eugenol (MESH:D005054), Eucalyptus oil (MESH:D000078122), thymol (MESH:D013943), frankincense (MESH:D065260), menthol (MESH:D008610), 1,8-cineole (MESH:D000077591), tobramycin (MESH:D014031), terpenes (MESH:D013729), menthone (MESH:C019466), terpinen-4-ol (MESH:C034019), linalyl acetate (MESH:C074463), Gram (-), methicillin (MESH:D008712), potassium (MESH:D011188), lavender oil (MESH:C045718), carbapenem (MESH:D015780), lipid (MESH:D008055), cinnamaldehyde (MESH:C012843)
- **Species:** Foeniculum vulgare [taxon 48038], Momordica charantia (balsam pear, species) [taxon 3673], Enterobacter sp. (species) [taxon 42895], Piper nigrum (species) [taxon 13216], Mentha spicata (spearmint, species) [taxon 29719], Ocimum tenuiflorum (holy basil, species) [taxon 204149], Pseudomonas aeruginosa (species) [taxon 287], Lavandula angustifolia (lavender, species) [taxon 39329], Acinetobacter baumannii (species) [taxon 470], Satureja intermedia (species) [taxon 751858], Syzygium aromaticum (clove, species) [taxon 219868], Eucalyptus cinerea (Argyle apple, species) [taxon 370640], Mentha x piperita (peppermint, species) [taxon 34256], Klebsiella pneumoniae (species) [taxon 573], Escherichia coli (E. coli, species) [taxon 562], Citrus reticulata (mandarin orange, species) [taxon 85571], Enterobacterales (order) [taxon 91347], Bacteria Latreille et al. 1825 (Bacteria stick insect, genus) [taxon 629395], Salvia rosmarinus (rosemary, species) [taxon 39367], Cercopithecidae (monkey, family) [taxon 9527], Melaleuca alternifolia (tea tree, species) [taxon 164405], Eucalyptus globulus (blue gum, species) [taxon 34317], Pimenta dioica (allspice, species) [taxon 375272], Artemisia turanica (species) [taxon 1177126], Curcuma longa (turmeric, species) [taxon 136217], Dracocephalum kotschyi (species) [taxon 180015], Citrus sp. (species) [taxon 2909989], Aquilaria crassna (species) [taxon 223751], Staphylococcus aureus (species) [taxon 1280], Ocimum basilicum (basil, species) [taxon 39350], Mus musculus (house mouse, species) [taxon 10090], Enterococcus faecium (species) [taxon 1352], Cinnamomum (genus) [taxon 13428], Zingiber officinale (ginger, species) [taxon 94328], Fungi (kingdom) [taxon 4751], Ovis aries (domestic sheep, species) [taxon 9940], Mentha (mints, genus) [taxon 21819], Diospyros discolor (species) [taxon 268838], Homo sapiens (human, species) [taxon 9606], Cuminum cyminum (cumin, species) [taxon 52462], Thymus vulgaris (common thyme, species) [taxon 49992]
- **Cell lines:** A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), MRC-9, A5 — Homo sapiens (Human), Finite cell line (CVCL_2629), MCF-7 — Homo sapiens (Human), Invasive breast carcinoma of no special type, Cancer cell line (CVCL_0031), RAW264.12 — Mus musculus (Mouse), Mouse leukemia, Cancer cell line (CVCL_0493), HCT-116 — Homo sapiens (Human), Colon carcinoma, Cancer cell line (CVCL_0291), HepG2 — Homo sapiens (Human), Hepatoblastoma, Cancer cell line (CVCL_0027), AD- — Homo sapiens (Human), Lung small cell carcinoma, Cancer cell line (CVCL_0C05), PANC- — Homo sapiens (Human), Pancreatic ductal adenocarcinoma, Cancer cell line (CVCL_0480), HT-29 — Homo sapiens (Human), Colon adenocarcinoma, Cancer cell line (CVCL_0320), HeLa — Homo sapiens (Human), Human papillomavirus-related cervical squamous cell carcinoma, Cancer cell line (CVCL_T292)

## Full text

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## Figures

3 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13024362/full.md

## References

167 references — full list in the complete paper: https://tomesphere.com/paper/PMC13024362/full.md

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Source: https://tomesphere.com/paper/PMC13024362