# Co-Transfected Plasmids Enhance Transient Expression of Reporter Genes

**Authors:** Shih-Yen Lo, Chee-Hing Yang, Yu-Ru Chan, Yi-Tzu Chao, Meng-Jiun Lai, Hui-Chun Li

PMC · DOI: 10.3390/biotech15010023 · BioTech · 2026-03-04

## TL;DR

Co-delivering plasmids with reporter genes boosts their short-term expression in cells, possibly due to competition for cellular resources like histones.

## Contribution

The study reveals that co-transfected plasmids enhance transient reporter gene expression through competition for histone interactions.

## Key findings

- Co-transfected plasmids enhance transient reporter gene expression across multiple cell types.
- The enhancement occurs during simultaneous DNA delivery and is not mediated by cytokine induction.
- Histone deacetylase inhibition with Pracinostat boosts transient gene expression dose-dependently.

## Abstract

Transient DNA transfection is routinely used to study gene function and elucidate the regulation of biological pathways, and it is also widely applied in biotechnology for large-scale recombinant protein production. The results of recent studies involving mammalian cells have highlighted that competition for cellular resources during gene expression can bias data interpretation, directly affecting co-transfection experiments. In this study, our results showed that co-transfected plasmids markedly enhance transient—but not stable—expression of various reporter genes across different cell types. The enhancement of transient reporter gene expression by additional plasmid DNA occurs when these DNAs are co-delivered simultaneously and is unlikely to be mediated by cytokine induction. Furthermore, co-transfected plasmids were shown to upregulate transcription, but not translation, of the reporter gene during transient expression. Thus, the observed enhancement may result from competition between co-transfected plasmids and reporter constructs for cellular proteins that interact with transfected DNA, such as histones. Indeed, Pracinostat (SB939), an inhibitor of histone deacetylase, was able to enhance the transient expression of the reporter gene dose-dependently. Overall, this study provides insights that may facilitate improved transient expression of recombinant genes in biotechnological applications.

## Linked entities

- **Chemicals:** Pracinostat (PubChem CID 49855250), SB939 (PubChem CID 49855250)

## Full-text entities

- **Genes:** POTEF (POTE ankyrin domain family member F) [NCBI Gene 728378] {aka A26C1B, POTE2alpha, POTEACTIN}, KDM1A (lysine demethylase 1A) [NCBI Gene 23028] {aka AIMAH3, AOF2, BHC110, CPRF, KDM1, LSD1}, H1-0 (H1.0 linker histone) [NCBI Gene 3005] {aka H1.0, H10, H1F0, H1FV}, EIF2AK2 (eukaryotic translation initiation factor 2 alpha kinase 2) [NCBI Gene 5610] {aka PKR, PPP1R83, PRKR}, SERPINE1 (serpin family E member 1) [NCBI Gene 5054] {aka PAI, PAI-1, PAI1, PLANH1}, PRL (prolactin) [NCBI Gene 5617] {aka GHA1, pPRL}, POLI (DNA polymerase iota) [NCBI Gene 11201] {aka RAD30B, RAD3OB, eta2}, IVNS1ABP (influenza virus NS1A binding protein) [NCBI Gene 10625] {aka ARA3, FLARA3, HSPC068, IMD70, KLHL39, ND1}, EIF2A (eukaryotic translation initiation factor 2A) [NCBI Gene 83939] {aka CDA02, EIF-2A, MST089, MSTP004, MSTP089}, AIM2 [NCBI Gene 103223764], CDC23 (cell division cycle 23) [NCBI Gene 8697] {aka ANAPC8, APC8, CUT23}, IFI16 [NCBI Gene 103223767], DDX41 [NCBI Gene 103245058], H2BC21 (H2B clustered histone 21) [NCBI Gene 8349] {aka GL105, H2B, H2B-GL105, H2B.1, H2BE, H2BFQ}, MIR122 (microRNA 122) [NCBI Gene 406906] {aka MIR122A, MIRN122, MIRN122A, hsa-mir-122, miRNA122, miRNA122A}, HDAC9 (histone deacetylase 9) [NCBI Gene 9734] {aka HD7, HD7b, HD9, HDAC, HDAC7B, HDAC9B}
- **Diseases:** Viral Infections (MESH:D014777), injury to (MESH:D014947)
- **Chemicals:** penicillin (MESH:D010406), UNC1999 (MESH:C000619732), Cyclic GMP-AMP (MESH:C584311), glutamine (MESH:D005973), streptomycin (MESH:D013307), PVDF (MESH:C024865), tranylcypromine (MESH:D014191), polybrene (MESH:D006583), doxycycline (MESH:D004318), Dulbecco's modified Eagle's medium (-), TRIzol (MESH:C411644), P (MESH:D010758), poly I:C (MESH:D011070), puromycin (MESH:D011691), Pracinostat (MESH:C557525), S (MESH:D013455), SDS (MESH:D012967), CO2 (MESH:D002245), NaHCO3 (MESH:D017693), polyethylenimine (MESH:D011094)
- **Species:** Cricket paralysis virus (no rank) [taxon 12136], Encephalomyocarditis virus (no rank) [taxon 12104], Orthopoxvirus vaccinia (species) [taxon 10245], Mus musculus (house mouse, species) [taxon 10090], Influenza A virus (no rank) [taxon 11320], hepatitis C virus [taxon 11103], Homo sapiens (human, species) [taxon 9606]
- **Mutations:** F12K
- **Cell lines:** A549 — Homo sapiens (Human), Lung adenocarcinoma, Cancer cell line (CVCL_0023), E. coli BL21 — Homo sapiens (Human), EBV-related Burkitt lymphoma, Cancer cell line (CVCL_M639), 293T — Homo sapiens (Human), Transformed cell line (CVCL_0063), Vero — Chlorocebus sabaeus (Green monkey), Spontaneously immortalized cell line (CVCL_0059), pLenti — Homo sapiens (Human), Prostate carcinoma, Cancer cell line (CVCL_A1BL), MDCK — Canis lupus familiaris (Dog), Spontaneously immortalized cell line (CVCL_0422), pISRE-Luc — Homo sapiens (Human), Transformed cell line (CVCL_JY95), HuH7 — Homo sapiens (Human), Adult hepatocellular carcinoma, Cancer cell line (CVCL_0336), CHO — Cricetulus griseus (Chinese hamster), Spontaneously immortalized cell line (CVCL_0213), pUC19 — Homo sapiens (Human), Prostate carcinoma, Cancer cell line (CVCL_5989), HeLa — Homo sapiens (Human), Human papillomavirus-related endocervical adenocarcinoma, Cancer cell line (CVCL_0030)

## Full text

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## Figures

16 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13023970/full.md

## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC13023970/full.md

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Source: https://tomesphere.com/paper/PMC13023970