# Divergent HIV-1 Restriction Phenotypes of IFITMs Expressed in Target Cells and Incorporated into Virions

**Authors:** Smita Verma, David Prikryl, Mariana Marin, Ruben M. Markosyan, Andrea Cimarelli, Gregory B. Melikyan

PMC · DOI: 10.3390/biom16030459 · Biomolecules · 2026-03-18

## TL;DR

This study explores how IFITM proteins restrict HIV-1 infection in two ways: by protecting target cells and by reducing the infectivity of new virus particles.

## Contribution

The study reveals that IFITM3 can reduce HIV-1 infectivity in virions even when it fails to protect target cells, suggesting distinct mechanisms for these two antiviral activities.

## Key findings

- IFITM3 mutants that fail to protect target cells still impair HIV-1 fusion/infection when incorporated into virions.
- Mislocalization of IFITM3 mutants explains their lack of antiviral activity in target cells.
- Co-incorporation of non-antiviral dog IFITM1 with human IFITM3 does not interfere with IFITM3's negative imprinting activity.

## Abstract

Interferon-induced transmembrane proteins (IFITMs) are broad-spectrum antiviral factors that restrict the entry of many enveloped viruses, including HIV-1, by modifying host membrane properties and trapping fusion at the hemifusion stage. Beyond blocking entry in target cells, IFITMs also reduce the infectivity of virions produced from IFITM-expressing cells, a phenomenon termed “negative imprinting”. Conserved motifs, such as the amphipathic helix and oligomerization motifs, have been reported to be essential for IFITM-mediated protection of target cells from viral infection. Yet, the impact of IFITM incorporation on progeny virion infectivity remains poorly defined. Here, we show that IFITM3 mutants defective in target cell protection activity still markedly impair HIV-1 fusion/infection upon incorporating into virions, without affecting viral maturation or Env incorporation. Immunofluorescence studies suggest mislocalization of the IFITM3 mutants as the reason for the lack of antiviral activity in target cells. Testing the antiviral activity of chimeras between antiviral and non-antiviral IFITM orthologs failed to clearly identify a domain responsible for reduction of HIV-1 infectivity, suggesting that multiple domains may be required for negative imprinting. Interestingly, co-incorporation of non-antiviral dog IFITM1 with human IFITM3 did not interfere with IFITM3’s negative imprinting activity, despite forming mixed hetero-oligomers. This finding implies a dominant, oligomerization-independent antiviral phenotype of IFITM3 in virions. Our findings suggest that IFITMs may protect target cells and negatively imprint progeny virions through distinct mechanisms, underscoring the need to further characterize the molecular basis for the reduced fusion competence of IFITM-containing HIV-1 particles.

## Linked entities

- **Genes:** IFITM3 (interferon induced transmembrane protein 3) [NCBI Gene 10410], IFITM1 (interferon induced transmembrane protein 1) [NCBI Gene 8519]
- **Proteins:** ERVW-1 (endogenous retrovirus group W member 1, envelope)
- **Species:** Homo sapiens (taxon 9606)

## Full-text entities

- **Genes:** IFITM3 (interferon induced transmembrane protein 3) [NCBI Gene 10410] {aka 1-8U, DSPA2b, IP15}, Env [NCBI Gene 155971], IFITM1 (interferon induced transmembrane protein 1) [NCBI Gene 8519] {aka 9-27, CD225, DSPA2a, IFI17, LEU13}
- **Diseases:** infection (MESH:D007239)
- **Species:** Canis lupus familiaris (dog, subspecies) [taxon 9615], Homo sapiens (human, species) [taxon 9606], Human immunodeficiency virus 1 (no rank) [taxon 11676]

## Full text

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## Figures

7 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13023901/full.md

## References

45 references — full list in the complete paper: https://tomesphere.com/paper/PMC13023901/full.md

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Source: https://tomesphere.com/paper/PMC13023901