# Inhibition of Glutamate Dehydrogenase as a Potential Strategy to Modulate Intrahepatic Cholangiocarcinoma Cell Metabolism

**Authors:** Anna Santarsiero, Ilaria Pappalardo, Alessandro Santarsiere, Ernesto Santoro, Marisabel Mecca, Antonio Evidente, Pierluigi Reveglia, Lucia Lecce, Federica De Carlo, Carlo Calabrese, Vittoria Infantino, Stefano Superchi, Simona Todisco

PMC · DOI: 10.3390/biom16030449 · Biomolecules · 2026-03-17

## TL;DR

This study explores how inhibiting glutamate dehydrogenase (GDH) in intrahepatic cholangiocarcinoma (iCCA) cells can disrupt their metabolism and growth.

## Contribution

The study identifies punicalagin as a novel competitive inhibitor of GDH and reveals a new link between NF-κB and GDH in iCCA.

## Key findings

- Pomegranate waste extract (PWE) downregulates GDH expression through inhibition of NF-κB signaling.
- PWE and its components inhibit GDH enzymatic activity in a dose-dependent manner.
- GDH targeting impairs iCCA cell growth and metabolism, suggesting it as a promising therapeutic target.

## Abstract

Cholangiocarcinoma (CCA) is a rare malignancy of the biliary tree with increasing global incidence and mortality and limited therapeutic options. Intrahepatic cholangiocarcinoma (iCCA) metabolism exhibits enhanced glycolysis, oxidative phosphorylation, and glutamine utilization. In this study, we investigated the therapeutic potential of targeting glutaminolysis in iCCA, identifying glutamate dehydrogenase (GDH)—which converts glutamate to α-ketoglutarate—as a key metabolic hub. We evaluated the effects of pomegranate waste extract (PWE), a by-product of industrial pomegranate juice production, on cell viability, proliferation, migration, ATP production, and extracellular acidification in CCLP1 cells, an established iCCA model. Our results are consistent with an altered cellular energy metabolism. We further assessed GDH enzymatic activity, expression, and transcriptional regulation in the presence or absence of PWE and its major components, punicalagin and ellagic acid. GDH expression was downregulated by PWE in a dose-dependent manner through inhibition of NF-κB signaling, revealing a new mechanistic link between NF-κB and GDH. In addition, GDH enzymatic activity was dose-dependently inhibited by PWE, as well as punicalagin and ellagic acid. Notably, punicalagin was identified as a novel competitive inhibitor of GDH. Overall, these findings provide the first evidence that modulation of glutaminolysis through GDH targeting impairs iCCA cell growth and metabolism, supporting GDH as a promising metabolic target. This study highlights pomegranate-derived compounds as potential leads for the development of adjunctive or preventive strategies in intrahepatic cholangiocarcinoma.

## Linked entities

- **Proteins:** NFKB1 (nuclear factor kappa B subunit 1)
- **Chemicals:** punicalagin (PubChem CID 16129719), ellagic acid (PubChem CID 5281855), glutamate (PubChem CID 611)
- **Diseases:** cholangiocarcinoma (MONDO:0019087), intrahepatic cholangiocarcinoma (MONDO:0003210)

## Full-text entities

- **Diseases:** malignancy (MESH:D009369), CCA (MESH:D018281)
- **Chemicals:** punicalagin (MESH:C115642), alpha-ketoglutarate (MESH:D007656), glutamate (MESH:D018698), ATP (MESH:D000255), PWE (-), ellagic acid (MESH:D004610), glutamine (MESH:D005973)

## Full text

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## Figures

6 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13023441/full.md

## References

54 references — full list in the complete paper: https://tomesphere.com/paper/PMC13023441/full.md

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Source: https://tomesphere.com/paper/PMC13023441