# Immunomodulatory effects of short-chain fatty acids and immune-supporting nutrients on slice cultures of head and neck tumors

**Authors:** Maria do Carmo Greier, Jozsef Dudas, Roland Hartl, Lukas Schmutzler, Benedikt Gabriel Hofauer

PMC · DOI: 10.3389/fnut.2026.1731077 · Frontiers in Nutrition · 2026-03-13

## TL;DR

This study explores how short-chain fatty acids and immune-supporting nutrients affect the tumor environment in head and neck cancers, finding variable effects on cell death and inflammation.

## Contribution

The study introduces a patient-specific model to evaluate how gut-derived metabolites and nutrients modulate tumor immunity in head and neck squamous cell carcinoma.

## Key findings

- IN and SCFAs reduced apoptosis in some patients, while SCFAs alone increased it in others.
- IN and combined treatments selectively modulated TNFα and IL-1β, but not IL-6 or IFNγ.
- Cytotoxic activity remained stable, with significant patient-specific variability observed.

## Abstract

Head and neck squamous cell carcinoma (HNSCC) has a highly immunosuppressive tumor microenvironment (TME), which limits the effectiveness of conventional and immunotherapies. Metabolites derived from the gut microbiota, such as short-chain fatty acids (SCFAs), and targeted nutritional interventions, including immunonutrition (IN), have been proposed as ways of influencing tumor immunity and cell viability. However, the effects of these factors on the complex TME of HNSCC remain incompletely understood. Patient-derived organotypic slice cultures (SC) therefore provide a clinically relevant model to study these interactions.

SC were generated from tumors of nine HNSCC patients and cultured under four conditions: control; SCFAs; IN (glutamine, alanine, and omega-3 fatty acids); and SCFAs combined with IN, for 4 days. Apoptotic activity was assessed via cleaved caspase-3 (CC3), and cytotoxic activity via Granzyme B (GrB) staining. Inflammatory markers (IL-1β, IL-6, TNFα and IFNγ) were quantified in cultured and treated tissue, as well as in the tissue’s supernatant. Quantitative immunohistochemistry (IHC) - based image analysis and dot blot assays were combined with statistical evaluation of patient- and treatment-specific effects.

Treatments with IN alone or in combination with SCFAs significantly reduced CC3 intensity, indicating decreased apoptosis. However, SCFA treatment alone increased CC3 intensity in SC of certain patients. GrB IHC intensity remained largely stable, with patient-specific differences driving the observed variability. Among the cytokines analyzed in the SC supernatants, TNFα and IL-1β were selectively modulated by IN and combined treatment, while IL-6 and IFN-γ remained largely unchanged. Analysis of cultured and treated tissue mirrored these trends, with TNFα and IFN-γ showing minimal variation and IL-6 being almost undetectable. These findings highlight significant heterogeneity in apoptotic and immune responses among patients.

SCFAs and IN exert modest but selective effects on apoptosis and inflammatory pathways in HNSCC, whereas cytotoxic activity remains stable. These results support the potential of tailoring metabolic and nutritional interventions to individual patients to modulate the tumor immune microenvironment, and provide a rationale for integrating SCFAs and IN with immunotherapeutic strategies in HNSCC.

## Linked entities

- **Proteins:** grb (gorbun), IL1B (interleukin 1 beta), IL6 (interleukin 6), TNF (tumor necrosis factor), IFNG (interferon gamma), CCL14 (C-C motif chemokine ligand 14)
- **Chemicals:** glutamine (PubChem CID 738), alanine (PubChem CID 239), omega-3 fatty acids (PubChem CID 56842239)
- **Diseases:** head and neck squamous cell carcinoma (MONDO:0010150), HNSCC (MONDO:0010150)

## Full-text entities

- **Genes:** CASP3 (caspase 3) [NCBI Gene 836] {aka CPP32, CPP32B, SCA-1}, TNF (tumor necrosis factor) [NCBI Gene 7124] {aka DIF, IMD127, TNF-alpha, TNFA, TNFSF2, TNLG1F}, IL6 (interleukin 6) [NCBI Gene 3569] {aka BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2}, IL1B (interleukin 1 beta) [NCBI Gene 3553] {aka IL-1, IL1-BETA, IL1F2, IL1beta}, GZMB (granzyme B) [NCBI Gene 3002] {aka C11, CCPI, CGL-1, CGL1, CSP-B, CSPB}, IFNG (interferon gamma) [NCBI Gene 3458] {aka IFG, IFI, IMD69}
- **Diseases:** tumor (MESH:D009369), HNSCC (MESH:D000077195), head and neck tumors (MESH:D006258), Inflammatory (MESH:D007249)
- **Chemicals:** alanine (MESH:D000409), omega-3 fatty acids (MESH:D015525), glutamine (MESH:D005973), SCFA (MESH:D005232)
- **Species:** Homo sapiens (human, species) [taxon 9606]

## Full text

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## Figures

10 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13021408/full.md

## References

63 references — full list in the complete paper: https://tomesphere.com/paper/PMC13021408/full.md

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Source: https://tomesphere.com/paper/PMC13021408