# Differences in gut microbiota and faecal metabolomics characteristics in preterm infants with feeding intolerance

**Authors:** Jinya Wang, Jiejing Zhang, Ji Wang, Danqiong Lu, Shiwei Lai, Xinyu Wang

PMC · DOI: 10.1099/jmm.0.002138 · Journal of Medical Microbiology · 2026-03-26

## TL;DR

This study identifies gut bacteria and metabolites that can help diagnose feeding intolerance in preterm infants.

## Contribution

The study introduces new diagnostic biomarkers for feeding intolerance in preterm infants using gut microbiota and metabolomic profiling.

## Key findings

- Feeding-intolerant infants had higher levels of Clostridium_P, Burkholderia, and Limosilactobacillus in their gut microbiota.
- Metabolites like arginine–proline and lactaldehyde showed strong predictive value for feeding intolerance.
- Diagnostic accuracy of biomarkers was evaluated using ROC analysis with AUC values up to 0.947.

## Abstract

Introduction. Feeding intolerance (FI) is one of the most common clinical issues in preterm infants, and there are currently no internationally unified diagnostic criteria.

Gap Statement. Screening valuable biomarkers and evaluating their diagnostic value for FI in preterm infants is of great significance.

Aim. This study aimed to identify and assess diagnostic biomarkers for feeding intolerance in preterm infants.

Methodology. This study included clinical data from 49 preterm infants admitted to a tertiary maternal and child health hospital in Zhejiang’s coastal region (January to June 2024). Based on feeding assessments at day 21 postpartum recorded in electronic medical records, infants were divided into feeding-tolerant (FT, n=34) and feeding-intolerant (FI, n=15) groups. Patient data analysis incorporated maternal age, gestational age, parity, antibiotic use, pregnancy complications and neonatal factors (birth weight, Apgar scores, delivery/feeding methods, vomiting, abdominal distension, gastric residuals, kangaroo care and enema use). Faecal samples underwent microbiome and metabolomic profiling to identify diagnostic biomarkers.

Results. Baseline data showed no significant differences in maternal-infant characteristics between groups (P>0.05). Dynamic monitoring of feeding tolerance in 21-day-old preterm infants revealed that the incidence of vomiting, abdominal distension, abnormal intestinal morphology and gastric residual volume >30% or >2 ml kg−1 was significantly higher in the FI group than in the FT group (P<0.001), whereas there was no significant difference in the frequency of nasogastric feeding between the two groups (P>0.05). Microbial analysis revealed enrichment of Escherichia (10.92%) and Klebsiella (6.88%) in FT infants, while FI infants specifically harboured increased Clostridium_P (3.93%), Burkholderia (4.06%) and Limosilactobacillus (4.94%). Metabolomic profiling identified significant pathway differences in ATP-binding cassette transporters (ABC transporters), carbohydrate digestion/absorption and propanoate metabolism. The receiver operating characteristic (ROC) analyses showed that metabolites arginine–proline (Arg–Pro, AUC=0.920), glutamic acid–arginine (Glu–Arg, AUC=0.873), lactaldehyde (AUC=0.900) and genera Clostridium_P (AUC=0.947), Escherichia (AUC=0.765), Staphylococcus (AUC=0.733) and Bifidobacterium (AUC=0.851) exhibited robust predictive value for FI.

Conclusion. Our study demonstrates that bacterial genera such as Staphylococcus, Clostridium_P, Bifidobacterium and Escherichia in the gut microbiota, along with metabolites including Arg–Pro, Glu–Arg and lactaldehyde identified in metabolomics, can serve as diagnostic criteria for feeding tolerance in preterm infants. Klebsiella shows a certain degree of diagnostic efficacy but falls into the category of ‘low accuracy’, requiring comprehensive evaluation considering the research background, sample characteristics and clinical context.

## Linked entities

- **Species:** Burkholderia (taxon 32008), Limosilactobacillus (taxon 2742598), Escherichia (taxon 561), Klebsiella (taxon 570), Staphylococcus (taxon 1279), Bifidobacterium (taxon 1678)

## Full-text entities

- **Genes:** ABCG2 (ATP binding cassette subfamily G member 2 (JR blood group)) [NCBI Gene 9429] {aka ABC15, ABCP, BCRP, BMDP, CD338, CDw338}, ABCB1 (ATP binding cassette subfamily B member 1) [NCBI Gene 5243] {aka ABC20, CD243, CLCS, ENPAT, GP170, MDR1}, VIP (vasoactive intestinal peptide) [NCBI Gene 7432] {aka PHM27}, ABCB6 (ATP binding cassette subfamily B member 6 (LAN blood group)) [NCBI Gene 10058] {aka ABC, LAN, MTABC3, PRP, umat}
- **Diseases:** lactose intolerance (MESH:D007787), inflammatory (MESH:D007249), vomiting (MESH:D014839), infants (MESH:D063766), premature rupture of membranes (MESH:D005322), FI (MESH:D001068), diarrhoea (MESH:D003967), Crohn's disease (MESH:D003424), ulcerative colitis (MESH:D003093), function (MESH:D003291), coagulation disorders (MESH:D001778), metabolic disorders (MESH:D008659), congenital gastrointestinal anomalies (MESH:D005767), reperfusion injury (MESH:D015427), systemic inflammatory response syndrome (MESH:D018746), congenital diseases affecting (MESH:D019964), abdominal distension (MESH:D000007), NEC (MESH:D020345), intestinal dysbiosis (MESH:D064806), birth asphyxia (MESH:D001237), preterm infants (MESH:D047928), inflammatory bowel disease (MESH:D015212)
- **Chemicals:** Lactaldehyde (MESH:C014634), proline (MESH:D011392), butyrate (MESH:D002087), ammonium acetate (MESH:C018824), SCFA (MESH:D005232), H2O (MESH:D014867), carbohydrate (MESH:D002241), alkaloids (MESH:D000470), oxygen compounds (MESH:D017601), Arg-Pro (MESH:C039357), amino acids (MESH:D000596), acetonitrile (MESH:C032159), propionic acid (MESH:C029658), Lipids (MESH:D008055), ACN (MESH:C084683), Propionate (MESH:D011422), acetic acid (MESH:D019342), arginine (MESH:D001120), butyric acid (MESH:D020148), Arg-Pro (-), agarose (MESH:D012685), heterocyclic compounds (MESH:D006571)
- **Species:** Veillonella (genus) [taxon 29465], Corynebacterium (genus) [taxon 1716], Burkholderia (genus) [taxon 32008], Lactobacillus (genus) [taxon 1578], Escherichia coli (E. coli, species) [taxon 562], Klebsiella (genus) [taxon 570], Clostridium (genus) [taxon 1485], Bifidobacterium (genus) [taxon 1678], Parabacteroides (genus) [taxon 375288], Sphingomicrobium (g__Sphingomonas_A, genus) [taxon 1227948], Homo sapiens (human, species) [taxon 9606], Streptococcus (genus) [taxon 1301], Clostridium sp. ATCC 29733 (species) [taxon 1507], Staphylococcus (genus) [taxon 1279]
- **Mutations:** glutamic acid-arginine, glutamic acid-arginine

## Full text

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## Figures

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## References

30 references — full list in the complete paper: https://tomesphere.com/paper/PMC13021176/full.md

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Source: https://tomesphere.com/paper/PMC13021176