# T-cell receptor anti-CMV CDR3s from bone marrow samples are associated with a worse overall survival for recurrent acute myeloid leukemia

**Authors:** Srijit Paul, Michael T. Aboujaoude, Vayda R. Barker, Tabitha R. Hudock, Arpan Sahoo, George Blanck

PMC · DOI: 10.1016/j.lrr.2026.100580 · 2026-03-14

## TL;DR

T-cell receptors targeting CMV in bone marrow samples are linked to worse survival in children with recurring acute myeloid leukemia.

## Contribution

This study identifies a novel association between anti-viral TCRs in bone marrow and poor survival in pediatric AML patients.

## Key findings

- Anti-CMV TCR CDR3s in recurrent AML bone marrow samples correlate with decreased overall survival.
- Anti-EBV TCR CDR3s in recurrent AML bone marrow samples also show reduced survival probabilities.
- The study suggests a possible link between viral infections and AML outcomes.

## Abstract

We assessed the relationship of AML patient outcomes and T-cell receptor (TCR) recombination reads representing known anti-viral TCR sequences. TCR complementary determining region-3′s (CDR3s) were obtained from the pediatric TARGET-AML dataset, and the TCR CDR3s representing bone marrow samples of primary and recurrent disease were matched to anti-viral TCR CDR3s. The patients representing the presence of the anti-viral CDR3s were then assessed for overall survival (OS). Patients with anti-CMV TCR CDR3s from bone marrow samples representing recurrent AML showed a significant decrease in OS probability. Decreases in OS probabilities were also observed for patients with anti-Epstein Barr Virus (EBV) TCR CDR3s obtained from recurrent AML, bone marrow samples. Overall, this study raises the question of whether there is a relationship between viral infections, or the basic impact of anti-viral inflammation, and outcomes in pediatric AML?

## Linked entities

- **Diseases:** acute myeloid leukemia (MONDO:0015667)

## Full-text entities

- **Genes:** TRBV20OR9-2 (T cell receptor beta variable 20/OR9-2 (non-functional)) [NCBI Gene 6962] {aka CDR3, TCRBV20S2, TCRBV2O, TCRBV2S2O}
- **Diseases:** AML (MESH:D015470), viral infections (MESH:D014777), inflammation (MESH:D007249)
- **Species:** Homo sapiens (human, species) [taxon 9606], human gammaherpesvirus 4 (Epstein Barr virus, no rank) [taxon 10376]

## Figures

5 figures with captions in the complete paper: https://tomesphere.com/paper/PMC13019061/full.md

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Source: https://tomesphere.com/paper/PMC13019061